Query= MSMg01no161_f09.b1 MSMg01no161_f09.b1 CHROMAT_FILE:
MSMg01no161_f09.b1 PHD_FILE: MSMg01no161_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:50 2005
(368 letters)
>mm_chr7_143800252_143801019
Length = 768
Score = 598 bits (309), Expect = e-175
Identities = 342/357 (95%), Gaps = 8/357 (2%)
Strand = Plus / Minus
Query: 16 gaattctagatgggggagtagatgaatatttgagagatcttgtgacccacgtgccccctt 75
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 568 gaattctagatgggggagtagatgaatatttgagagatcttgtgacccaggtgccccctt 509
Query: 76 agtcattcttccatgaaaca----accccaaatgttcagagagggcctcaaaggaaatgg 131
|||||||||||||||||| | | ||||||||||||||||||||| |||||||||
Sbjct: 508 agtcattcttccatgaaaaaatata----aaatgttcagagagggcctcataggaaatgg 453
Query: 132 ggaatgtgttcgttcatctttccaggaagccccatagcccttagcgccttggccaaggga 191
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 452 ggaatgtgttcgttcatcttcccaggaagccccataacccttagcgccttggccaaggga 393
Query: 192 catttccagtgtctccaccccacaggaccagaacagtgggggcagcttgcatctccctcc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 catttccagtgtctccaccccacaggaccagaacagtgggggcagcttgcatctccctcc 333
Query: 252 agctcaaagcagaggtaccctcttgttcttggctcattcaaaatgggaatcaaggaacac 311
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 332 agctcaaagcagaggtaccctcttgttcttggctcactcaaaatgggaatcaaggaacac 273
Query: 312 ctccaactgggattttaaagttataaggttttgtgatgtcacctccatgttctccag 368
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cgccaactgggattttaaagttataaggttttgtgatgtcacctccatgttctccag 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_f09.g1 MSMg01no161_f09.g1 CHROMAT_FILE:
MSMg01no161_f09.g1 PHD_FILE: MSMg01no161_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:50 2005
(379 letters)
>mm_chr7_143691779_143692557
Length = 779
Score = 694 bits (359), Expect = 0.0
Identities = 374/379 (98%)
Strand = Plus / Plus
Query: 1 ataattaccgtgctcattgatggagatacatttgaatacgttcaactcctaggggaacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ataattaccgtgctcattgatggagatacatttgaatacgttcaactcctaggggaaagg 260
Query: 61 agccggctgtccgggagagtctgaaaaaatgccctcagcctcttttcttcttgaaattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccggctgtccgggagagtctgaaaaaatgccctcagcctcttttcttcttgaaattag 320
Query: 121 ggatctgtggcatacagtaatgttataagaagaagatccaaagtgcccgcaatttcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatctgtggcatacagtaatgttataagaagaagatccaaagtgcccgcaatttcttta 380
Query: 181 aatataattaatcaagtgaagcatgtaacgtaatgaatgtatttgatagaaggtactgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatataattaatcaagtgaagcatgtaacgtaatgaatgtatttgatagaaggtactgtt 440
Query: 241 caaacacgagctttatctgagcctgtgttggaatcgctgaaaggaagggacaccacatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaacacgagctttatctgagcctgtgttggaatcgctgaaaggaagggacaccacatcc 500
Query: 301 cgtgttcctgcgaaaaaatggtacctggttgtttcctccgtgtcaccggtaggcctgctc 360
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 501 cgtgttcctgcgaaaaaatggtacctggctgccgcctccgtgtcaccggtaggcctgctc 560
Query: 361 atcaaattaaaagctgaca 379
|||||||||||||||||||
Sbjct: 561 atcaaattaaaagctgaca 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
