Query= MSMg01no165_j24.b1 MSMg01no165_j24.b1 CHROMAT_FILE:
MSMg01no165_j24.b1 PHD_FILE: MSMg01no165_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:51 2005
(549 letters)
>mm_chr7_95018703_95019652
Length = 950
Score = 1025 bits (530), Expect = 0.0
Identities = 545/550 (99%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 1 ttgacacattcaatattctcaatatcaacttcgaaatttcagtgtttgaaattcaacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacacattcaatattctcaatatcaacttcgaaatttcagtgtttgaaattcaacctt 260
Query: 61 tgaatcccaggagaatgagtcctgaagtgtggtactttttgaaagttcacagagcccatc 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaatcccaggagaatgaatcctgaagtgtggtactttttgaaagttcacagagcccatc 320
Query: 121 tttggataagaaatatattgagtacatttctgactcatgaactgtctacacaatccacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggataagaaatatattgagtacatttctgactcatgaactgtctacacaatccacaa 380
Query: 181 ttagataaatgctttattagagttctctcagtggtaaggttagaagaaattgtttttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagataaatgctttattagagttctctcagtggtaaggttagaagaaattgtttttttg 440
Query: 241 tttgtttgg-tttttttgttttgtttttggttgtggacaaatcaaaagatcaatagaaaa 299
||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 441 tttgtttggttttttttgttttgtttttggttttggacaaatcaaaggatcaatagaaaa 500
Query: 300 attttaatgttcatgatacttagcttttcactgtgatagaatatcatttccaaagaagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttaatgttcatgatacttagcttttcactgtgatagaatatcatttccaaagaagaa 560
Query: 360 actggtgtgtttctcttatagtgtgactatacatgcctattacccagacaaataagaccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actggtgtgtttctcttatagtgtgactatacatgcctattacccagacaaataagaccc 620
Query: 420 agaattttaatataaaaaatgttaatattgatgagcacactgtacttcacatatttcctg 479
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 agaattttaatataaaaaatgttaatattgatgagcacactgtacttcacgtatttcctg 680
Query: 480 tatttaggataaatacatttctagatttgatttctagctactctgagaatattttatgat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatttaggataaatacatttctagatttgatttctagctactctgagaatattttatgat 740
Query: 540 tatgcactta 549
||||||||||
Sbjct: 741 tatgcactta 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_j24.g1 MSMg01no165_j24.g1 CHROMAT_FILE:
MSMg01no165_j24.g1 PHD_FILE: MSMg01no165_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:51 2005
(642 letters)
>mm_chr7_95178531_95179572
Length = 1042
Score = 1226 bits (634), Expect = 0.0
Identities = 640/642 (99%)
Strand = Plus / Minus
Query: 1 tggagggatttgagagggattgaagtgcaaacagagatgtgggtaataaaattatgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tggagggatttgagagggattgaagtgcaaacagagatgtgggtaataaaattatgaaaa 783
Query: 61 tgaggttttaaaagggtttgaggttgtccagaattggaatcctaggcattcaagtaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tgaggttttaaaagggtttgaggttgtccagaattggaatcctaggcattcaagtaaagt 723
Query: 121 gctgttaaagactcttgctgtgttctgaataactgaatttgagtgaattccaaaggaaaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gctgttaaagactcttgctatgttctgaataactgaatttgagtgaattccaaaggaaaa 663
Query: 181 gactaagttatttggagaaaggaaaaaacaacttgggggtgatgagggattccaattgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gactaagttatttggagaaaggaaaaaacaacttgggggtgatgagggattccaattgcc 603
Query: 241 agaatcatgaaaagatgctgcacactgtaatatcaaagctgtgagctgacttgttcttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agaatcatgaaaagatgctgcacactgtaatatcaaagctgtgagctgacttgttcttgt 543
Query: 301 ttctatttgtatttacagtaaaagggacaaaagctatgaaaattctgtagtctggtgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttctatttgtatttacagtaaaagggacaaaagctatgaaaattctgtagtctggtgagg 483
Query: 361 aaaagtaccatgtatagttaaagtggcaggcactgtggataaagtggctttgagccaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaaagtaccatgtatagttaaagtggcaggcactgtggataaagtggctttgagccaact 423
Query: 421 atatagctttaaaggtataaagtccacaaaagaaaaaccaaaaactttgcaatagaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atatagctttaaaggtataaagtccacaaaagaaaaaccaaaaactttgcaatagaaaag 363
Query: 481 attccctagagatagtgtcccacccattggtagcaacatgatataataaggatagcatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 attccctagagatagtgtcccacccattggtagcaacatgatataataaggatagcatca 303
Query: 541 ggacatagcaatggaaacttaccttagaaacttttatttaataagagagttcccgatcaa 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggacatagcaatggaaacttactttagaaacttttatttaataagagagttcccgatcaa 243
Query: 601 agggcttttgggtattatattcaagcagtgacccaagaagtg 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agggcttttgggtattatattcaagcagtgacccaagaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
