Query= MSMg01no165_p22.b1 MSMg01no165_p22.b1 CHROMAT_FILE:
MSMg01no165_p22.b1 PHD_FILE: MSMg01no165_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:22 2005
(616 letters)
>mm_chr7_134779797_134780812
Length = 1016
Score = 1180 bits (610), Expect = 0.0
Identities = 616/618 (99%), Gaps = 2/618 (0%)
Strand = Plus / Plus
Query: 1 gacctcagattcacagagatctgcctgcttctgcttcatgagtgctgagattaaagacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gacctcagattcacagagatctgcctgcttctgcttcatgagtgctgagattaaagacgt 258
Query: 61 gtgtcacaatgcccggtataacggtccttttgaagtagtaaaaatggagatagtatgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtgtcacaatgcccggtataacggtccttttgaagtagtaaaaatggagatagtatgagg 318
Query: 121 gtgaccatgatcatcagccactgacttaacaggggtccacctctggcatttttt-aagca 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 319 gtgaccatgatcatcagccactgacttaacaggggtccacctctggcatttttttaagca 378
Query: 180 ctcactacatgccaaatgctctagtagttagtggtctaattagctgaatccaaacaacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctcactacatgccaaatgctctagtagttagtggtctaattagctgaatccaaacaacaa 438
Query: 240 tcttcgaggtagtgtggttattttcagagaagaaaagcattggctcaggccccggctctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcttcgaggtagtgtggttattttcagagaagaaaagcattggctcaggccccggctctt 498
Query: 300 agggtgcttgcctggaatgtataaagcccaagggtggagacagaaggatcagaagtcaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agggtgcttgcctggaatgtataaagcccaagggtggagacagaaggatcagaagtcaat 558
Query: 360 tcatggctggcctgggttacatgagaccctgtctctaaagggttaaaataaaaagaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcatggctggcctgggttacatgagaccctgtctctaaagggttaaaataaaaagaaaaa 618
Query: 420 aaaa-tagaatctcagaatttcattaatttgcccaaggagctcagcagagaatccattct 478
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaaatagaatctcagaatttcattaatttgcccaaggagctcagcagagaatccattct 678
Query: 479 ggaatatagggtaggcccagagtcgtcaagaaaatttcgtgtctcttccctgaaagcaag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ggaatatagggtaggcccagagtcgtcaagaaaatttcgtgtctcttccctgaaagcaag 738
Query: 539 agagcaaattttccggagagcgccaggctgcggagcagaacgggttattcccactgagac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agagcaaattttccggagagcgccaggctgcggagcagaacgggttattcccactgagac 798
Query: 599 gcaggcgttcggctccta 616
||||||||||||||||||
Sbjct: 799 gcaggcgttcggctccta 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_p22.g1 MSMg01no165_p22.g1 CHROMAT_FILE:
MSMg01no165_p22.g1 PHD_FILE: MSMg01no165_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:22 2005
(636 letters)
>mm_chr7_134932759_134933800
Length = 1042
Score = 623 bits (322), Expect = 0.0
Identities = 354/374 (94%), Gaps = 18/374 (4%)
Strand = Plus / Minus
Query: 1 cttgattgctgtgcagacaacagtggctctttcctcaggtctcgcataccagcagaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cttgattgctgtgcagacaacagtggctctttcctcaggtctcgcataccagcagaagtt 303
Query: 61 attacctatttcattgtccctaaaatgtaa------tgcagtgacacaaagggacttgtg 114
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 attacctatttcattgtccctaaaatgtaatctgtctgcagtgacacaaagggacttgtg 243
Query: 115 taacctgtctcttgcccttcttctatcctcttctaacaaggttttttttgtttgtttgtt 174
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 242 taacctgtctcttgcccttcttctatcctcttctaacaaggtttttt---ttt-tttgtt 187
Query: 175 tgttttttgttttgttttgttttgagacagggtttctctgtgtagccctggctgtcctgg 234
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgttttttgtt--------ttttgagacagggtttctctgtgtagccctggctgtcctgg 135
Query: 235 cactcactttgtagaccaggctggccttgaactcagaaatccacctgcctctgcctcccg 294
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 134 cactcactttgtagaccaggctggccttgaactcagaaattcacctgcctctgcctcccg 75
Query: 295 agtgctgggattaaaggcgtgcgccaccacacccgaccaaagcagggttttaatgtacat 354
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 74 agtgctgggattaaaggcgtgcgccaccacacccgactaaagcagggttttaatgtacat 15
Query: 355 ttcttctaaaaaaa 368
||||||||||||||
Sbjct: 14 ttcttctaaaaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1042
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1032
Effective search space: 646032
Effective search space used: 646032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
