Query= MSMg01no166_k09.b1 MSMg01no166_k09.b1 CHROMAT_FILE:
MSMg01no166_k09.b1 PHD_FILE: MSMg01no166_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:12 2005
(442 letters)
>mm_chr7_69030578_69031417
Length = 840
Score = 772 bits (399), Expect = 0.0
Identities = 433/455 (95%), Gaps = 20/455 (4%)
Strand = Plus / Plus
Query: 4 ggaattctttctttctgtatactttttactcaagaaacaatgaacaatttatttg----- 58
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggaattctttctttctgtatactttttactcaagaaacaatgaacaatttatttggacca 249
Query: 59 ---------tagattgctggtcaaatatttaaaaagttcccaaaattccaagctggtaaa 109
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tacaatttgtagattgctggtcaaatatttaaaaagttcccaaaattccaagctggtaaa 309
Query: 110 ccaatcagtatggtcaatgaagaaccatgagtaagtgtgtctgacacaaatgcacgtaga 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ccaatcagtatggtcaatgaagaaccatgagtaagtgtgtctgacacaaatgcacgtaga 369
Query: 170 gtacccaaaagcccacaacaatattgtataaaggtcctgaaaactgaagtcctaaggttc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtacccaaaagcccacaacaatattgtataaaggtcctgaaaactgaagtcctaaggttc 429
Query: 230 tctaaactctgtgaaggaaattccaataataattttgattctttacaaaaccattcatgt 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 430 tctaaactctgtgaaggaaattccaataataattttgattctttacaaaaccattcacgt 489
Query: 290 cactattaaactgtgtaacttatcttgactgctaattttattgttaaacctagaagattc 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cactattaaactgtgtaacttatcttgactgctaattttattgttaaacctagaagattc 549
Query: 350 acactaagtagaactt--caccaattgattctccccattaaaggtgatgtgtttataaaa 407
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 550 acactaagtagaactttgca--aattgattctccccattaaaggtgatgtgtttataaaa 607
Query: 408 aaaaaatgaaaagaggggatatgttttggtggatg 442
|||| |||| ||||||||||||||||||||||||
Sbjct: 608 aaaa--tgaagagaggggatatgttttggtggatg 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 840
Length adjustment: 9
Effective length of query: 433
Effective length of database: 831
Effective search space: 359823
Effective search space used: 359823
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_k09.g1 MSMg01no166_k09.g1 CHROMAT_FILE:
MSMg01no166_k09.g1 PHD_FILE: MSMg01no166_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:12 2005
(405 letters)
>mm_chr7_69177055_69177859
Length = 805
Score = 714 bits (369), Expect = 0.0
Identities = 396/405 (97%)
Strand = Plus / Minus
Query: 1 tcttattatttttactaattaagagtcacagatacacctttcccatcctgacttaacttt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 605 tcttattatttttactaattaagagtcacagacacacctttcccatcctgacttaacttt 546
Query: 61 cagaatgaaattgtcactgtagtttgggatataattgatcccaaaatttactcacttctc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cagaatgaaattgtcactgcagtttgggatataattgatcccaaaatttactcacttctc 486
Query: 121 tcattctctctgctcacaacactctattgatgaaagacaagggaagaagcctgcccatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcattctctctgctcacaacactctattgatgaaagacaagggaagaagcctgcccatac 426
Query: 181 tttcatggaaagaattttacctgcaaaatgtcttttctctatttggcttgtcacctcaat 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 425 tttcatggaaagaattttacctgcaaaatatcttttctctatttggcttgtcacctcaat 366
Query: 241 ttactgaccaatgtcccctgattagcaactccttccattctctagtgactttagatgtgt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 365 ttactgaccaatgtcccctgattagcaactccttccattctccagtgactttagatgtgt 306
Query: 301 tatgttatatacattattaaaattatattacctcacccgagttgctattttgaatcaaaa 360
|| ||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 305 tacgttatgtacattattaaaattatattaccttatctgagttgctattttgaatcaaaa 246
Query: 361 ggttttctaaaattgttttcattacatactaacatgtggctcttg 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggttttctaaaattgttttcattacatactaacatgtggctcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
