Query= MSMg01no167_m07.b1 MSMg01no167_m07.b1 CHROMAT_FILE:
MSMg01no167_m07.b1 PHD_FILE: MSMg01no167_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:37 2005
(368 letters)
>mm_chr7_82265915_82266682
Length = 768
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttgggtttgcaaagggtttgctacatccagttttaaaatggggtctcttatta 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggaattcttgggtttggaaagggtttgctacatccagttttaaaatggggtctcttatta 282
Query: 64 ccatctccgtcagtgggattcttagtcagagagttctccctgaatggtgtagttttccct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccatctccgtcagtgggattcttagtcagagagttctccctgaatggtgtagttttccct 222
Query: 124 acactgttgatggacagctttacacatgtggccagggtcgggacaaatgagggaggccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 acactgttgatggacagctttacacatgtggccagggtcgggacaaatgagggaggccag 162
Query: 184 actctcagattctggcaaaagtgagaggcagctgtcatcctatggtggcaggaaccaggg 243
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 161 actctcagattctggcaaaagtgggaggcagctgtcatcctatggtggcaggaaccaggg 102
Query: 244 gaaaaaacagcattcacagagcccaacggggtctcaaacagtagtggaagaataacctga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaaaaaacagcattcacagagcccaacggggtctcaaacagtagtggaagaataacctga 42
Query: 304 aaggagctgtggtcctggagggacttagccattgccaaaga 344
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 aaggagctgtggtcctggagggacttagccattgccaaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_m07.g1 MSMg01no167_m07.g1 CHROMAT_FILE:
MSMg01no167_m07.g1 PHD_FILE: MSMg01no167_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:37 2005
(438 letters)
>mm_chr7_82092410_82093246
Length = 837
Score = 737 bits (381), Expect = 0.0
Identities = 419/439 (95%), Gaps = 15/439 (3%)
Strand = Plus / Plus
Query: 1 tacataagaaaaataggtttgttgatattttaatgaggttgttttgaagctacaaattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacataagaaaaataggtttgttgatattttaatgaggttgttttgaagctacaaattag 260
Query: 61 tttgtaataaaacaatactgatatttttgtaatttatggttataatttatttttgcttcc 120
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tttgtaataaaacaatactgata-ttttgtaatttatggttattatttatttttgcttcc 319
Query: 121 attttggttctttaattgtctttagtcatattttaaaattattttggtgtagaatttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attttggttctttaattgtctttagtcatattttaaaattattttggtgtagaatttttg 379
Query: 181 taaatttactaaaaagttatttctagtaatttgatttttcctgtgtaaatgtaaatatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaatttactaaaaagttatttctagtaatttgatttttcctgtgtaaatgtaaatatac 439
Query: 241 tactctattatctcccaattttcttgttgagggagaaaaatgaaatgataattttatata 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tactctattatctccccattttcttgttgagggagaaaaatgaaatgataattttatata 499
Query: 301 ttgaacatatggccatatattttaact-tatatataatctccaccccctgttatttctag 359
||||||||||||||||||||||||||| || | ||| ||||||||||||
Sbjct: 500 ttgaacatatggccatatattttaactctaaa---aat----------tgttatttctag 546
Query: 360 taagagtttttataggactttctaaaagctacggttacatctagagatcagtacagaaaa 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 547 taagagtttttataggacttcctaaaagctacggttacatctagagatcagtacagaaaa 606
Query: 420 caatatctggttgacccat 438
|||||||||||| ||||||
Sbjct: 607 caatatctggtttacccat 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 837
Length adjustment: 9
Effective length of query: 429
Effective length of database: 828
Effective search space: 355212
Effective search space used: 355212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
