| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-168A12.T7 (MSMg01no168_a12.b1) | MSMg01-168A12.TJ (MSMg01no168_a12.g1) |
|---|
| ACC | AG365340 | AG365341 |
|---|
| length | 1,185 | 1,281 |
|---|
length of high quality
(start - end) | 364 (25 - 388) | 325 (72 - 396) |
|---|
| definition | CHROMAT_FILE: MSMg01no168_a12.b1 PHD_FILE: MSMg01no168_a12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:36:58 2005 | CHROMAT_FILE: MSMg01no168_a12.g1 PHD_FILE: MSMg01no168_a12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:36:58 2005 |
|---|
| singlet/doublet | singlet | --- |
|---|
| BLAST hit | unique | no hit data |
|---|
| sequence | NGGACATTCGGCCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTCTG
TATGTAAACATATCTAATTTTTCCTTTCTTAATTGCAAGTTTCTGCTTTC
CATCTGTCATTTGTCTTGCCCCCAAACACACACACATATACAAACATGAA
TACAAGCATACACAGTCACACATACACAAACACACAAACATGCGTAGACA
CACATGTAGCCACATGCACACACAGAGAAATGTGTGTGCACACGGATTGT
TTTTCCTTGCATCACTCTTTCCTTCATGTAATCCAATAATATTTAATAAC
CATTCACCTTTATCTTCTCAAACCACTTCTGTGGTGTAGAGGAAACACTC
CTAGGAACTGGCCTGTGATAGACTCAGAGAATCAGCTTTTATTTGTTGGT
AATCCAGAGGGAGGATTCAAATGTGGATGAATTTCCTTTTTTTTTTTCCC
CCCCCCCCCCAANAAAANNANNTTTTAAAAAAAAAAAGGAGGGGTTTTNT
TTTTTGTTTGTTTTTTTTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTGTT
TTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTGTTGTTTGTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTGTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTGTTTTTTTTT
TTTTGTTNTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTT
TTTTTTTTGTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTT
TGTTGTTTTTGTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTT
TTTGTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTNTTTTTTTTTTT
TTTTTTTTTGTTTTTTGTTGTTTTTTTTTTTGTTTTTTGTTGTTTGTTTT
TTTTTTTTTTTTTTTTGTGTNTTTTGTTTTTTTTTGTGTTTTTTTTTGTT
TGTTTTTTTTTGTGTTTTTTTTTTTTTTGGTTTTT
| NNTTAAGCTAGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCACTTGAAGAATGGATACAGAAAATGT
GGTACATTCACTCAGAGGAAATTAACCCCAAGCTATTTTAAACAAGACAT
CATGAACATTGCTGGCAAAAGAATGGAACTTGAAAAGACCATCCTGAGAG
ACAAATCTAGACCCAGAAAGACAAACCTGCTATGTACGCAATTCAAAGTC
ACTATTAGCCATAAAGTAAAGGACAACCATGCTACAACCCACAGACTCAA
AGAAACTAAGTAACAAGGAGGGCTCAGGGTGATATGCACGAATCTTACTG
TGAAGAGAAATTAGACTACACATTATGCATGAATGAGGGAGGCTGGATTT
TTTGTTGAGNNNCNNNNNCCCNCCCCCCCTTCCNGGAANNNNNGCCCCTT
TTTTTTTTTCCCCCCCCCCCNNNNGNNNNTTCCCCCTCAAAAAAAAAAAA
GGGGGTTTTTTTTTTNTTCCCTCCTCTTCTCCTTTTCCCTTCTCTCTTTC
TTTTCTTTTCTCCTCCTTTTTCTCTTTCTCTCTCCTCTTACCTATTTTTT
TCTGACCTCATCCTTTCTATTTTACCTTCTCCTTTCTTCTTTATTTTACT
TTTCATTCTTATTTCCTTCCTTCTTTATTTACTTTACTTTACTTTACTTT
CATTTCTATTTTTTCCTTTCTTTTACTTTTCTTTTTTTTCTTATTTTTTT
TTTTCCTCTTTTCATCACTTATCTCTCTCTATTTATTCTAAATTATATTT
CATTTTTTTCTTCGTCTTTCACCTTCTTTATTCTATCTTCATTATTCTTT
TTTTTCTCCTTCTTTCTTTTCACATTTTTTCTCCATTTATATTTTATTTT
ATACTTCCCTTATTTTCCTTTTCTATCCTTTCCTATCTTATTTTCCTCTC
TTTTAATCTCTTTTTCCTCTCTTCCTATTCTTTTTAATATTCTTCTTTAT
TTTTCTTTATCCTCTTTTTTTTTCTACTTTCTTCTTTTTACCCAATTTTT
ACCTAATCTTTTTTACTTTTTACTCATCACATTACGCTCCTTTTCTCATT
TTTTTCTTATATCACTTACTTTATCTTCTCAAATTCCTTTCTTCTCTCTT
CATCTCACTCTTTACTTTTACTTTCCTTTTCTTCATTCCTTCTTAGAACT
TCCTCCCTTAATATTCCTTTTATTTCGTCTTCTTCTCTTTTTTCATTTTA
TTATTTATTCTTTCCCTATTCTATATTCCTT
|
|---|
| quality values | Open.Hide. 0 3 6 6 6 7 9 10 10 9 10 8 8 8 8 8 8 8 10 15 10 9 9 19 19 24 24 24 36 39 39 39 39 34 34 37 37 37 47 39 42 39 33 43 26 22 10 11 10 19
22 42 23 22 10 10 10 24 26 32 21 10 9 9 9 15 21 43 57 59 59 57 57 57 50 50 50 33 33 33 33 30 22 11 10 8 8 8 9 23 28 34 28 30 30 32 29 35 33 37
30 22 28 23 27 18 22 28 37 37 37 37 37 34 25 19 12 12 14 19 23 23 14 14 15 26 30 47 47 47 47 59 59 48 47 38 36 36 36 36 36 39 43 43 43 48 57 57 50 50
50 50 54 54 54 54 54 54 54 54 54 68 68 68 54 54 48 50 48 57 48 50 50 50 57 48 44 46 43 44 44 48 47 57 54 57 57 57 57 57 57 46 44 42 42 46 43 43 46 46
54 54 59 57 50 50 50 37 35 35 43 50 57 50 50 48 50 57 54 57 57 57 52 52 52 52 52 54 57 57 50 44 33 29 29 43 44 52 57 52 54 52 57 52 57 57 57 57 57 59
59 57 57 57 57 57 57 57 57 57 57 57 57 68 68 59 59 57 68 68 68 68 57 59 68 59 68 68 68 68 57 50 50 43 43 52 43 43 43 44 57 57 68 68 68 59 59 57 59 59
57 57 57 57 57 57 57 57 57 68 68 68 57 57 59 47 40 32 24 23 23 28 41 42 57 57 57 59 48 44 37 31 30 30 42 40 39 35 35 35 39 37 37 46 42 47 47 50 48 47
43 33 32 28 37 37 42 33 28 23 20 28 25 42 40 33 36 37 37 35 35 35 43 36 37 28 28 33 37 39 37 34 26 19 15 10 8 8 8 7 6 7 8 7 8 9 19 16 20 24
28 28 33 39 39 32 28 22 15 12 12 12 15 18 12 18 12 12 11 12 15 22 19 11 11 12 12 12 15 10 10 10 11 12 21 10 10 9 13 14 16 16 21 19 11 9 9 9 12 18
19 26 26 32 32 32 21 15 11 7 7 3 0 3 8 8 3 0 0 3 0 0 3 8 8 11 11 11 18 19 20 23 28 22 16 18 6 6 6 6 6 7 8 11 12 9 13 3 0 3
17 19 22 23 20 18 17 10 10 8 8 8 8 10 8 7 7 8 9 9 9 9 9 8 8 8 8 8 10 8 8 8 10 8 8 11 9 9 11 9 8 8 6 6 8 8 7 7 7 13
11 14 16 16 17 17 17 10 10 8 13 17 29 16 15 12 11 13 8 10 10 11 11 10 15 15 23 28 30 22 24 12 10 10 9 9 9 9 9 10 7 7 7 17 19 8 8 8 10 10
17 22 12 16 16 24 20 10 10 10 16 22 31 31 33 22 22 22 21 21 21 20 17 15 12 8 8 8 11 11 19 19 28 22 22 13 10 10 10 10 13 12 12 9 10 8 10 8 9 12
17 12 12 12 18 22 29 29 23 28 24 21 20 24 16 16 10 21 21 24 24 17 17 18 20 14 23 17 24 17 16 17 12 14 21 24 30 30 23 14 9 9 9 10 10 9 9 9 9 10
17 10 11 16 22 21 24 22 14 13 12 9 9 12 9 11 15 9 8 8 8 10 10 15 19 25 22 19 10 11 11 21 27 30 25 19 16 12 12 9 10 10 11 11 27 17 16 11 11 16
19 23 23 28 24 24 15 15 8 9 9 10 19 19 8 8 8 8 22 19 19 15 9 9 8 8 9 7 8 8 10 8 17 16 14 9 9 9 9 12 22 22 21 20 12 12 13 15 19 15
8 9 9 9 12 8 13 8 6 6 10 19 10 11 13 21 10 9 9 10 11 11 14 19 17 9 9 9 10 10 19 15 16 15 21 21 23 24 22 12 12 10 12 9 9 9 10 19 19 22
20 15 15 7 9 9 3 0 3 15 13 10 12 12 17 10 10 10 10 12 14 16 16 17 18 12 9 11 10 15 8 6 6 11 19 18 21 22 19 21 22 22 22 27 27 28 30 37 29 17
11 11 11 13 16 15 17 8 8 8 8 9 10 22 25 18 14 11 12 12 9 10 10 11 12 9 9 8 8 6 6 13 13 28 23 23 11 12 16 19 27 21 11 11 11 19 19 22 11 11
10 8 7 7 9 9 11 8 8 6 6 8 8 9 17 11 11 8 6 6 7 9 9 11 10 10 11 12 9 9 11 17 19 34 34 37 20 22 18 14 12 10 21 12 10 10 9 9 10 10
15 10 8 8 10 15 17 17 12 10 10 11 8 13 13 20 19 15 8 7 7 8 8 9 10 9 10 9 18 14 25 16 18 15 13 10 10 3 0 3 7 7 10 12 10 12 12 22 21 26
31 34 24 32 16 18 12 8 8 8 8 15 17 15 10 9 9 6 6 6 6 15 17 19 21 14 17 14 13 11 11 10 10 10 14 11 8 6 6 6 8 6 6 8 8 9 10 15 23 37
32 29 24 19 15 11 11 12 22 16 10 8 9 8 9 8 8 7 7 3 0 3 10 10 8 8 10 11 11 11 11 11 13 13 9 9 9 10 9 10 10 20 19 13 11 9 9 9 9 11
8 6 6 7 7 9 9 7 6 9 7 7 8 8 8 10 10 11 11 11 16 14 15 14 12 14 12 13 9 8 6 9 6 6 6 | Open.Hide. 0 0 3 6 6 6 6 6 6 7 6 6 6 6 6 8 6 6 6 6 9 12 13 8 8 8 7 8 10 14 21 23 22 22 18 21 21 30 29 24 16 16 26 34 47 50 50 50 43 43
43 42 42 42 38 57 53 59 59 59 59 59 47 33 21 11 10 11 11 12 15 15 24 23 29 30 31 31 36 36 38 57 50 53 53 50 53 53 43 43 30 30 35 39 39 39 43 46 46 43
37 37 37 37 23 23 11 11 11 11 11 12 16 21 21 23 34 34 42 42 33 37 25 22 11 10 12 12 12 20 21 33 37 37 39 44 41 53 53 50 50 50 57 57 57 57 57 57 57 57
57 57 57 57 57 57 57 57 57 57 54 57 57 68 68 68 68 68 68 68 59 59 57 57 54 57 57 59 41 36 27 22 17 17 24 35 44 57 68 68 68 57 57 57 57 57 57 57 57 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 59 59 59 59 68 57 59 59 59 57 57 57 68 68 68 59 59 59 59 59 59 57 68 68 68 57 57 57 57 57 57
57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 59 59 57 59 59 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 57 57 57 57 59 59 57 52 52 52 57 57 57 57 57
57 59 59 59 57 57 57 57 54 57 59 59 59 68 68 68 57 57 57 57 43 43 43 44 44 28 28 23 23 23 44 44 57 57 57 57 57 57 57 57 68 68 59 59 57 57 57 57 57 57
57 57 59 59 59 59 59 54 57 57 57 48 48 48 48 48 48 57 48 48 48 48 48 59 59 59 59 59 57 57 57 57 57 48 48 48 48 48 48 43 43 39 25 25 11 11 11 12 12 14
15 17 12 9 9 12 15 23 3 0 0 0 3 0 0 0 0 0 3 10 3 0 3 10 9 9 9 6 6 6 6 6 3 0 3 7 7 3 0 0 0 0 0 3 9 18 15 15 11 12
19 19 23 26 26 23 16 9 9 9 9 11 17 23 26 32 21 11 16 3 0 0 0 0 3 0 0 0 0 3 10 9 8 8 7 6 6 6 6 7 12 16 14 14 11 8 8 9 9 9
9 10 9 10 12 16 10 8 10 10 9 10 9 12 3 0 3 13 8 8 8 8 8 8 8 10 10 13 12 8 8 8 8 8 8 10 19 11 9 9 9 9 9 10 10 9 9 8 8 9
9 9 9 16 15 11 11 9 8 8 8 8 8 8 9 9 9 12 8 8 6 6 8 6 6 6 6 8 8 8 8 8 8 8 8 8 10 8 8 8 8 7 8 8 8 8 13 13 10 10
8 10 8 8 6 6 8 10 10 10 8 8 6 6 8 8 10 12 8 8 8 8 8 8 8 8 10 11 11 8 8 6 6 8 8 9 8 8 6 6 10 10 10 8 8 8 9 10 13 15
10 10 8 8 8 10 12 13 9 8 8 9 9 9 9 9 8 8 8 6 6 8 8 10 8 8 8 9 8 8 8 8 8 8 10 10 11 8 8 6 6 8 8 8 8 8 8 8 10 10
11 10 8 8 6 6 8 6 6 8 8 8 8 8 6 8 8 8 8 8 8 10 12 11 11 11 16 10 11 9 7 10 8 8 8 8 10 8 8 8 8 8 8 8 10 10 13 11 11 11
11 10 10 10 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 9 10 9 9 11 10 9 10 8 8 8 8 8 10 8 8 8 8 8 8 9 9 9 8 8 8 8 10 8 12 7
7 7 10 8 13 21 10 10 9 9 8 8 8 6 8 8 8 8 10 13 14 13 10 10 10 13 8 8 8 8 8 8 8 8 8 8 8 6 10 8 8 8 9 8 12 8 8 8 8 8
8 11 10 10 8 10 8 8 6 6 6 7 10 9 9 7 7 8 8 9 10 10 10 10 10 10 10 10 12 10 10 10 10 12 11 9 8 8 8 8 8 10 12 11 10 10 9 9 9 8
8 8 12 15 12 15 15 12 13 8 8 8 8 8 8 9 9 10 9 8 10 8 8 8 8 9 8 8 10 10 8 8 6 6 8 8 8 8 6 6 8 6 9 9 8 8 8 6 8 8
8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 11 13 9 11 8 10 8 8 10 10 10 10 10 11 10 10 10 9 10 9 12 13 11 9 9 10 10 8 6 6
10 10 16 12 12 8 8 8 8 8 8 6 6 8 10 9 8 10 8 10 10 12 13 8 8 8 8 8 8 12 8 8 6 6 8 8 10 12 10 10 10 8 8 8 8 8 8 8 11 11
10 8 8 6 6 6 6 8 9 9 9 9 13 10 8 8 8 9 8 8 6 6 8 6 9 8 8 6 6 8 8 8 7 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8
8 11 12 10 8 8 8 8 8 8 8 6 6 8 8 10 8 8 9 9 10 9 12 12 10 8 8 6 6 6 6 8 6 7 8 8 10 10 12 12 11 10 8 8 8 10 8 8 8 10
6 6 13 10 8 8 8 8 8 8 8 10 7 7 8 8 8 10 6 9 8 8 10 11 11 8 10 10 10 9 8 10 8 6 6 8 8 10 11 11 13 13 10 8 8 6 6 8 8 8
8 8 8 6 6 8 8 8 8 8 8 8 8 8 6 6 10 8 8 8 10 10 10 13 11 9 9 9 8 8 10 10 8 6 6 8 8 13 13 18 10 8 8 8 8 8 10 9 9 10
8 8 8 6 7 7 6 8 8 12 12 15 12 8 8 6 6 8 8 8 6 8 8 9 8 8 8 8 8 8 8 |
|---|
