Query= MSMg01no168_c03.b1 MSMg01no168_c03.b1 CHROMAT_FILE:
MSMg01no168_c03.b1 PHD_FILE: MSMg01no168_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:08 2005
(406 letters)
>mm_chr7_142737608_142738414
Length = 807
Score = 681 bits (352), Expect = 0.0
Identities = 382/392 (97%), Gaps = 1/392 (0%)
Strand = Plus / Minus
Query: 16 gaattc-atacagatttaagcatcctatttgcctcttcttacagaccaccaaacactgct 74
|||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 607 gaattcaatacagatttaagcattctatttgcctcttcttacagaccatcaaacactgct 548
Query: 75 agcatttgggggaaaaactcagaaagtgcctttgaaatatttctagattgctaagaatag 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agcatttgggggaaaaactcagaaagtgcctttgaaatatttctagattgctaagaatag 488
Query: 135 ccctaactcccctcaccccagtacaaaattattaagtttctgattcttgcacttttatat 194
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccctaactcccctcagcacagtacaaaattattaagtttctgattcttgcacttttatat 428
Query: 195 tatatttgagcccaagttggaactttgctttaaaaaaatgtttaaatgagtggctgatga 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tatatttgagcccaagttggaactttgctttaaaaaaatgtttaaatgagtggctgatga 368
Query: 255 cgtcacccacagaggactgctatgttaaagcctgttaatgtgggcagaaagaaatgtatt 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cgtcacccacagaggactgctatgttaaagcctgttaatgtgggcagaaagaaatgtatt 308
Query: 315 gacttactgatgcgcttggtcaagagccactaggagctcaggcaaagagcattttttcaa 374
|| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 307 gaattactgatgcgcttggtcaagagccactaggagctcaggcaaagagcactaagtcaa 248
Query: 375 cagaggctggaagttaaggacagagtgactgg 406
||||||||||||||||||||||||||||||||
Sbjct: 247 cagaggctggaagttaaggacagagtgactgg 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_c03.g1 MSMg01no168_c03.g1 CHROMAT_FILE:
MSMg01no168_c03.g1 PHD_FILE: MSMg01no168_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:08 2005
(346 letters)
>mm_chr7_142595211_142595956
Length = 746
Score = 176 bits (91), Expect = 2e-48
Identities = 106/111 (95%)
Strand = Plus / Plus
Query: 235 gtggactgaaattgtacaagcccacgtgccatcttggagcccagctgccatcaccccttc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtggactgaaattgtacaagcccacgtgccatcttggagcccagctgccatcaccccttc 494
Query: 295 ttttttacgaccaagctccacgtcagggacagtggtccagcctcaccgctt 345
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagtccacgaccaagctccacgtcagggacagtggtccagcctcaccgctt 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
