Query= MSMg01no168_d15.b1 MSMg01no168_d15.b1 CHROMAT_FILE:
MSMg01no168_d15.b1 PHD_FILE: MSMg01no168_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:18 2005
(274 letters)
>mm_chr7_83114265_83114939
Length = 675
Score = 509 bits (263), Expect = e-149
Identities = 270/275 (98%), Gaps = 5/275 (1%)
Strand = Plus / Minus
Query: 5 gaattccaggacaaccagggatttacacagagaaacctgaccccccc-----ccaaaaaa 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 519 gaattccaggacaaccagggatttacacagagaaacctgacccccccccccgccaaaaaa 460
Query: 60 aaacatacaaacaaacaaagaatgcagtgggagtgtgtaaagaggatgccctctaggctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaacatacaaacaaacaaagaatgcagtgggagtgtgtaaagaggatgccctctaggctt 400
Query: 120 cttcagtgattcaggaaccactctgcggtcccagaggctttaaacaacgggacaaaacta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cttcagtgattcaggaaccactctgcggtcccagaggctttaaacaacgggacaaaacta 340
Query: 180 atttctcactagtgttctgcagcttaactgctggtgacactggttccctgaagcagtgta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atttctcactagtgttctgcagcttaactgctggtgacactggttccctgaagcagtgta 280
Query: 240 actcagaatcaaggcactgtctttattccacagca 274
|||||||||||||||||||||||||||||||||||
Sbjct: 279 actcagaatcaaggcactgtctttattccacagca 245
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 675
Length adjustment: 9
Effective length of query: 265
Effective length of database: 666
Effective search space: 176490
Effective search space used: 176490
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_d15.g1 MSMg01no168_d15.g1 CHROMAT_FILE:
MSMg01no168_d15.g1 PHD_FILE: MSMg01no168_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:18 2005
(244 letters)
>mm_chr7_82998078_82998721
Length = 644
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 agcagagaacagggtggttcccgttctcccgaagttcccattcattcagaggggggctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagagaacagggtggttcccgttctcccgaagttcccattcattcagaggggggctga 260
Query: 61 cagaaggcagagccaataagtacagccacctcagaaagggctgcagggaaggtagcctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaaggcagagccaataagtacagccacctcagaaagggctgcagggaaggtagcctgg 320
Query: 121 gaggtttgaggaaggggaacaggacaggaagcatctatggagacaaagtggttgggggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggtttgaggaaggggaacaggacaggaagcatctatggagacaaagtggttgggggag 380
Query: 181 gcttctctggtgacatttgaaccagagagctgtgctaggtaggctgtgtaaagttcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttctctggtgacatttgaaccagagagctgtgctaggtaggctgtgtaaagttcaaag 440
Query: 241 gc 242
||
Sbjct: 441 gc 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
