Query= MSMg01no168_f04.b1 MSMg01no168_f04.b1 CHROMAT_FILE:
MSMg01no168_f04.b1 PHD_FILE: MSMg01no168_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:29 2005
(311 letters)
>mm_chr7_75536565_75537275
Length = 711
Score = 542 bits (280), Expect = e-158
Identities = 300/314 (95%), Gaps = 13/314 (4%)
Strand = Plus / Plus
Query: 4 ggaattctgatggtatgagatgattatgttatgatacttggcactccaggggggcaatgg 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgatgggatgagatgattatgttatgatacttggcactccaggggggcaatgg 263
Query: 64 catgtcctaacattctggacaggaagtgactgcttggtccagggatcctctgtgcagtgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catgtcctaacattctggacaggaagtgactgcttggtccagggatcctctgtgcagtgg 323
Query: 124 gggaagcatagaagagatagtagagatgtcatttaggagcctgtggctctgttggggctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggaagcatagaagagatagtagagatgtcatttaggagcctgtggctctgttggggctc 383
Query: 184 agcctgtgaactgctggtgggagcccattctctggcaagtactgagaaaagttaagttca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcctgtgaactgctggtgggagcccattctctggcaagtactgagaaaagttaagttca 443
Query: 244 aatgtcaggtcacttagtatgtggtgctttttttt-------aatggccaagtacccgag 296
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 aatgtcaggtcacttagtatgtggtgctt------cagcaagaatggccaagtacccgag 497
Query: 297 taaagtaacccttg 310
||||||||||||||
Sbjct: 498 taaagtaacccttg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_f04.g1 MSMg01no168_f04.g1 CHROMAT_FILE:
MSMg01no168_f04.g1 PHD_FILE: MSMg01no168_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:29 2005
(279 letters)
>mm_chr7_75693106_75693784
Length = 679
Score = 530 bits (274), Expect = e-155
Identities = 277/278 (99%)
Strand = Plus / Minus
Query: 1 aggggctcaaatatactgaattttaaacaatccagatgtctatgattttacaagaaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aggggctcaaatatactgaattttaaacaatccagatgtctatgattttacaagaaatct 419
Query: 61 tcaagatccaaagtaggcttaaatgatgttaaattctatgttagtcagcacagagactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcaagatccaaagtaggcttaaatgatgttaaattctatgttagtcagcacagagactcc 359
Query: 121 tattgtcatggtcttcctccagttactgtggcagacagtttgatgtcccctacatgtgac 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 358 tattgtcatggtcttcctccagttactgtggcatacagtttgatgtcccctacatgtgac 299
Query: 181 tcatttcctgagatgtattttcactcatttttcatagttttaatttttttgagattttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tcatttcctgagatgtattttcactcatttttcatagttttaatttttttgagattttat 239
Query: 241 tcatttttaatcttatgagtatgggtgttttgcctgcc 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tcatttttaatcttatgagtatgggtgttttgcctgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
