Query= MSMg01no168_m13.b1 MSMg01no168_m13.b1 CHROMAT_FILE:
MSMg01no168_m13.b1 PHD_FILE: MSMg01no168_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:15 2005
(417 letters)
>mm_chr7_47842785_47843603
Length = 819
Score = 716 bits (370), Expect = 0.0
Identities = 394/402 (98%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 16 gaattcc-ggtcctcaaaactgtacagcaagcagtgagctgctgagccgtatcccaaacc 74
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 216 gaattccaggtcctcaaaactgtacagcaagcagtgagctgctgagccatatcccaaacc 275
Query: 75 tctcacttctgggtacatttgtgaaggcatttctagttagatcctgagagctctgagcta 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tctcacttctgggtacatttgtgaaggcatttctagttagatcctgagagctctgagcta 335
Query: 135 agcagttaattatggactcgaatgaag-aaaaaaaagcatcattggtacggataaagata 193
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 336 agcagttaattatggactcgaatgaagaaaaaaaaagcatcattggtatggataaagata 395
Query: 194 gctggaggaggaaagtagccaattgagtacttaggctatagcttgttctgtgtgctagtt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gctggaggaggaaagtagccaattgagtacttaggctatagcttgttctgtgtgctagtt 455
Query: 254 tctgtttcctggctgccatgatgtatgctgactaccatatcctcactaccaaggtgaact 313
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 456 tctgtttcctggctgccatgatgtatgctgactaccatgtcctcactaccaaggtgaact 515
Query: 314 gccattgggaaagcattggcccatataaataattctttcctttaacttctcttttatttt 373
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 516 gccattgggaaagcattggcccatataaataattctttcctttaacttctcaggtatttt 575
Query: 374 ggtgatagtaacacaaaagtagctggtataacatctaataga 415
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ggtgatagtaacacaaaagtagctggtataacatctaataga 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 819
Length adjustment: 9
Effective length of query: 408
Effective length of database: 810
Effective search space: 330480
Effective search space used: 330480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_m13.g1 MSMg01no168_m13.g1 CHROMAT_FILE:
MSMg01no168_m13.g1 PHD_FILE: MSMg01no168_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:15 2005
(380 letters)
>mm_chr7_48013210_48013989
Length = 780
Score = 669 bits (346), Expect = 0.0
Identities = 370/378 (97%)
Strand = Plus / Minus
Query: 1 aaggggtatccaaagtctgacctccatctggtttccttgggtttagtgtgcagcatactg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aaggggtatccaaagtctgaactccatctggtttccttgggtttagtgtgcagcatactg 519
Query: 61 ttagaaaacagttggcacatagccaagacagaatcacttcagtaacttgacaaacacaat 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 518 ttagaaaacagttggcacatagccaagacaggatcacttcagtaacttgacaaacacaat 459
Query: 121 caagttttatcagcccccaaaaatgaacttcatggaaatattcctttaggaaaaggcaca 180
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 458 caagtttcatcagcccccaaaaatgaacttcacggaaatattcctttaggaaaaggcaca 399
Query: 181 gagaccaaaacatccaagtggtctcagaagaagggaaactagaaactgaaagacagctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gagaccaaaacatccaagtggtctcagaagaagggaaactagaaactgaaagacagctca 339
Query: 241 cttcagcagatggacaaaccatgacaaagaaacacaactaccacaacacaaacaacacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cttcagcagatggacaaaccatgacaaagaaacacaactaccacaacacaaacaacacct 279
Query: 301 gtgagtattgtgtccccacctaccatttttccaactcctctatagtggactctaaaacta 360
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 278 gtgagtattgtgtccccacctaccaacctaccaactcctctatagtggactctaaaacta 219
Query: 361 cagaaatagctaaaatgt 378
||||||||||||||||||
Sbjct: 218 cagaaatagctaaaatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
