Query= MSMg01no168_o21.b1 MSMg01no168_o21.b1 CHROMAT_FILE:
MSMg01no168_o21.b1 PHD_FILE: MSMg01no168_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:29 2005
(206 letters)
>mm_chr7_102627938_102628543
Length = 606
Score = 325 bits (168), Expect = 1e-93
Identities = 196/206 (95%)
Strand = Plus / Minus
Query: 1 tgaaagtattgttaagtagnattaaattattattattgttaaaaaccagtttttagttat 60
||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 406 tgaaagtattgttaaatagcattaaattattattattgttaaaaaccagtctttaattat 347
Query: 61 tatagncctaccaagtccctaagtgtattacacccaactgcccattactagaatctcatt 120
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 346 tataaccctaccaagtccctaagtgtattacacccaactgcccattactggaatctcatt 287
Query: 121 cagtttggggatttcctatgttaggtgaattcatcttcctaggtgcagctgactaggctc 180
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 286 cagtttggggatttcctatgacaggtgaattcatcttcctaggtgcagccgactaggctc 227
Query: 181 cctgtttcctctggcattctcactgt 206
||||||||||||||||||||||||||
Sbjct: 226 cctgtttcctctggcattctcactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_o21.g1 MSMg01no168_o21.g1 CHROMAT_FILE:
MSMg01no168_o21.g1 PHD_FILE: MSMg01no168_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:29 2005
(320 letters)
>mm_chr7_102520664_102521386
Length = 723
Score = 586 bits (303), Expect = e-172
Identities = 317/325 (97%), Gaps = 7/325 (2%)
Strand = Plus / Plus
Query: 1 agacaatgttctgggagtcttgagatgtactttgagcttgaaagaggtgaatttggtgta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agacaatgttctgggagtcttgagatgtactttgagcttggaagaggtgaatttggtgta 260
Query: 61 ttttgtggttactgcttgttttctgtctctttctctctcc-----ttttttttcctttga 115
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 261 ttttgtggttactgcttgttttctgtctctttctctctccttttttttttttt--tttga 318
Query: 116 aagaacgtgaaaaatagattaaaacagggacaacacatgaaacatattttgttatgttgt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aagaacgtgaaaaatagattaaaacagggacaacacatgaaacatattttgttatgttgt 378
Query: 176 gtaagacgtggtgataagattgaaagctgcttctagctccaggcacctttgatagcaagc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtaagacgtggtgataagattgaaagctgcttctagctccaggcacctttgatagcaagc 438
Query: 236 tgcctttccagatctgtcactaagtgtcaccagcgctggtttcttggacagaagggacag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgcctttccagatctgtcactaagtgtcaccagcgctggtttcttggacagaagggacag 498
Query: 296 atctgagttcctcctgccatgggtt 320
|||||||||||||||||||||||||
Sbjct: 499 atctgagttcctcctgccatgggtt 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 723
Length adjustment: 9
Effective length of query: 311
Effective length of database: 714
Effective search space: 222054
Effective search space used: 222054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
