Query= MSMg01no170_n16.b1 MSMg01no170_n16.b1 CHROMAT_FILE:
MSMg01no170_n16.b1 PHD_FILE: MSMg01no170_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:55 2005
(312 letters)
>mm_chr7_146769287_146769997
Length = 711
Score = 513 bits (265), Expect = e-150
Identities = 297/313 (94%), Gaps = 11/313 (3%)
Strand = Plus / Plus
Query: 5 gaattctcctgcttattgctttctggcaagctggacctcgggccagaatgcagcggtttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctgcttattgctttctggcaagctggacctcgggccagaatgcagcggtttt 264
Query: 65 ggaattcaagaaccaggaccaaaggatcaccacactcactgacttcggctgggtatgcgt 124
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 ggaattcaagaaccaggacgaaaggatcaccttactcactgacttcggctgggtatgcgt 324
Query: 125 ttgcagtctagcggacagagcactggctatagacccggcctgtagagcccactaggcctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcagtctagcggacagagcactggctatagacccggcctgtagagcccactaggcctt 384
Query: 185 aatttcttttctagtacaggggcctctcactccatagaattgttgggcagttaactgaag 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 aatttcttttctagtacaggggcctctcactccataaaattgttgggcagttaactgaag 444
Query: 245 ttgcagccacctagtgcggccggcgcacattttt-----atctgagaaggtagcacgctg 299
|||||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 445 ttgcagccacctagtgcggc-ggcgcaca-----gcaggatccgagaaggtagcacgctg 498
Query: 300 gcgcttatttctt 312
|||||||||||||
Sbjct: 499 gcgcttatttctt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 711
Length adjustment: 9
Effective length of query: 303
Effective length of database: 702
Effective search space: 212706
Effective search space used: 212706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_n16.g1 MSMg01no170_n16.g1 CHROMAT_FILE:
MSMg01no170_n16.g1 PHD_FILE: MSMg01no170_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:55 2005
(234 letters)
>mm_chr7_146926622_146927255
Length = 634
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Minus
Query: 1 agaagtgtctagttaaaccccttaggagataggagagaggactaccaataaggcatatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agaagtgtctagttaaaccccttaggagataggagagaggactaccaataaggcatatct 373
Query: 61 ttacagattggcagtgaaggttctgcaacaatctgtgtaatttgccacggcatcggctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttacagattggcagtgaaggttctgcaacaatctgtgtaatttgccacggcatcggctgt 313
Query: 121 taacatgcagacatggaaagcatggaagcccagcaacagctctcagtagcacctcacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 taacatgcagacatggaaagcatggaagcccagcaacagctctcagtagcacctcacata 253
Query: 181 tgacactcgggtcactttcttggatcagttccaggcacgctgctttggcttg 232
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 252 tgacactcgggtcactttcttggatcagttgcaggcacgctgctttggcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
