Query= MSMg01no171_k10.b1 MSMg01no171_k10.b1 CHROMAT_FILE:
MSMg01no171_k10.b1 PHD_FILE: MSMg01no171_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:55 2005
(309 letters)
>mm_chr7_150500327_150501036
Length = 710
Score = 540 bits (279), Expect = e-158
Identities = 297/303 (98%), Gaps = 1/303 (0%)
Strand = Plus / Plus
Query: 5 gaattctccatccctgcctccaagcctttttctatcaagacaactaagtgactcttttc- 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccatccctgcctccaagcctttttctatcaagacaactaagtgactcttttca 264
Query: 64 caccagggccaccattaggacaggtaagagaggacagacccaggaagtcattgcttcccc 123
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccagggccagcattaggacaggtaagagaggacagacccaggaagtcattgcttcccc 324
Query: 124 caggactattatttcctagcctggccctgctttcaggaacatttttaagcctgcattgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 caggactattatttcctagcctggccctgctttcaggaacatttttaagcctgtattgtt 384
Query: 184 ggctctctaactttgtttaaacacacaatcttgtaagagtagaagagaagaggcatgggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggctctctaactttgtttaaacacacaatcttgtaagagtagaagagaagaggcatgggc 444
Query: 244 agccaggagtacaatgaacagctgtgttaataaaggagagccaggaaatggaggcagaaa 303
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 445 agccaggagtacaatgaacagctgtgggaacaaaggagagccaggaaatggaggcagaaa 504
Query: 304 gta 306
|||
Sbjct: 505 gta 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 710
Length adjustment: 9
Effective length of query: 300
Effective length of database: 701
Effective search space: 210300
Effective search space used: 210300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_k10.g1 MSMg01no171_k10.g1 CHROMAT_FILE:
MSMg01no171_k10.g1 PHD_FILE: MSMg01no171_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:55 2005
(194 letters)
>mm_chr7_150665557_150666150
Length = 594
Score = 360 bits (186), Expect = e-104
Identities = 192/194 (98%)
Strand = Plus / Minus
Query: 1 cccaagtgctgggattaaaggcatgtgccaccactgcccagcacacctctccactctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cccaagtgctgggattaaaggcatgtgccaccactgcccagcacacctctccactctcaa 377
Query: 61 tctggcctgctcccgaccatacaccacctctccatccagagaccaccattcttatcctat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 376 tctggcctgctcccgaccatacaccacctctccatccagagaccaccactcttatcctat 317
Query: 121 tcaccggctacctgccccctacctgaagccacatcctggtctcttccctctaccggctta 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 316 tcaccggctacctgccccctacctgaagccacattctggtctcttccctctaccggctta 257
Query: 181 gagctaggcctgcc 194
||||||||||||||
Sbjct: 256 gagctaggcctgcc 243
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
