Query= MSMg01no171_p08.b1 MSMg01no171_p08.b1 CHROMAT_FILE:
MSMg01no171_p08.b1 PHD_FILE: MSMg01no171_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:18 2005
(315 letters)
>mm_chr7_88587707_88588421
Length = 715
Score = 563 bits (291), Expect = e-165
Identities = 304/311 (97%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 5 gaattcaggaaccactttctcctggttcgtcctcctttggttatttttatgtatctatag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaaccactttctcctggttcgtcctcctttggttatttttatgtatctatag 264
Query: 65 ggtatatatatctaccaatcacccagtcttaattctattgtcagtctgagaaagagacag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtatatatatctaccaatcacccagtcttaattctattgtcagtctgagaaagagacag 324
Query: 125 aacagtatccagaaaatagtaaggaaatcatttaaagattttcagttttagattgggtta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacagtatccagaaaatagtaaggaaatcatttaaagattttcagttttagattgggtta 384
Query: 185 gtgcatgtgtttatgtgatagatatatatatat-atatatcacacatacacacacatgta 243
||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||
Sbjct: 385 gtgcatgtgtttatgtgattgatatatatatatca-----cacacatacacacacatgta 439
Query: 244 catgaatgctgctgctcatggaggccagaagttttcagatccaccagagctggagttatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catgaatgctgctgctcatggaggccagaagttttcagatccaccagagctggagttatg 499
Query: 304 tgcagttgtga 314
|||||||||||
Sbjct: 500 tgcagttgtga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_p08.g1 MSMg01no171_p08.g1 CHROMAT_FILE:
MSMg01no171_p08.g1 PHD_FILE: MSMg01no171_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:18 2005
(178 letters)
>mm_chr7_88741992_88742569
Length = 578
Score = 313 bits (162), Expect = 3e-90
Identities = 171/174 (98%)
Strand = Plus / Minus
Query: 4 aggtcagaggatgggttacttgagggcttggctgaagggcaggtaagggacgtgagggag 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 aggtcagaggatgggttacttgagggcttggctgaagggcaggtaagggacgtgagcgag 318
Query: 64 agaaggttctagaagtttgcagtactaaaacaccatcgaatcaggaactttgggagaact 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggaaggttctagaagtttgcagtactaaaacaccatcgaatcaggaactttgggagaact 258
Query: 124 cgtttgtgacaagtgtcactttttgaaagcttctcaaagcccttggcaaaagca 177
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cgtttgtgacaagtgccactttttgaaagcttctcaaagcccttggcaaaagca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
