MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-172A15
Chromosome	7 (Build37)
Map Location	90,689,755 - 90,689,944
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160
Downstream gene	Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2, LOC100039239
Link	Open Mouse BAC browser

Click to get alignment info.

name	Adamtsl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269959 MGI:3028499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 6 Proteins

name	1700129I04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330577 MGI:1914618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eftud1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101592 MGI:2141969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038986 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC619808 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rkhd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108797 MGI:1918252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 72 ESTs, 13 Proteins

name	LOC619909 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins pseudo : _no_value

name	A530021J07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330578 MGI:3687211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	EG666160 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666160 MGI:3643208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Tmc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233424 MGI:2669033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stard5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170460 MGI:2156765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16170 MGI:1270855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phgdh-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83494 MGI:1933203
definition	gene_synonym : D7Ssb1 note : 3-phosphoglycerate dehydrogenase, pseudogene 1 pseudo : _no_value

name	LOC666170 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666170
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 865 ESTs, 12 Proteins pseudo : _no_value

name	1700026D08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75556 MGI:1922806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mesdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80889 MGI:1891420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mesdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67943 MGI:1891421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9930013L23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80982 MGI:2443629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210412D01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70178 MGI:1917428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arnt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11864 MGI:107188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039239 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Adamtsl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380776 GeneID:269959 MGI:3028499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 6 Proteins product : ADAMTS-like 3 transcript_id : XM_194370.6

name	1700129I04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288849 GeneID:330577 MGI:1914618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700129I04 gene transcript_id : NM_177894.4

name	Eftud1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341587 GeneID:101592 MGI:2141969
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation factor Tu GTP binding domain containing 1 transcript_id : NM_175317.2

name	LOC100038986 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257534 GeneID:100038986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100038986 transcript_id : XM_001472043.1

name	LOC619808 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94380778 GeneID:619808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC619808 transcript_id : XM_884181.2

name	Rkhd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257536 GeneID:108797 MGI:1918252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 72 ESTs, 13 Proteins product : ring finger and KH domain containing 3 transcript_id : XM_620516.4

name	Tmc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665718 GeneID:233424 MGI:2669033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like gene family 3 transcript_id : NM_177695.4

name	Stard5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254328 GeneID:170460 MGI:2156765
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : StAR-related lipid transfer (START) domain containing 5 transcript_id : NM_023377.4

name	Il16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130040 GeneID:16170 MGI:1270855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 16 transcript_id : NM_010551.3

name	1700026D08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351561 GeneID:75556 MGI:1922806
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700026D08 gene transcript_id : NM_029335.2

name	Mesdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364039 GeneID:80889 MGI:1891420
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm development candidate 1 transcript_id : NM_030705.3

name	Mesdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543246 GeneID:67943 MGI:1891421
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm development candiate 2 transcript_id : NM_023403.2

name	9930013L23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373414 GeneID:80982 MGI:2443629
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9930013L23 gene transcript_id : NM_030728.3

name	2210412D01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526905 GeneID:70178 MGI:1917428
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210412D01 gene transcript_id : NM_133722.1

name	Arnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328094 GeneID:11864 MGI:107188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aryl hydrocarbon receptor nuclear translocator 2 transcript_id : NM_007488.2

name	LOC100039239 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257543 GeneID:100039239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039239 transcript_id : XM_001472533.1

name	Adamtsl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380777 GeneID:269959 MGI:3028499
definition	codon_start : 1 product : ADAMTS-like 3 protein_id : XP_194370.6

name	1700129I04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288850 CCDS:CCDS21409.1 GeneID:330577 MGI:1914618
definition	codon_start : 1 product : hypothetical protein LOC330577 protein_id : NP_808562.3

name	Eftud1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424996 CCDS:CCDS21410.1 GeneID:101592 MGI:2141969
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : elongation factor Tu GTP binding domain containing 1 protein_id : NP_780526.1

name	LOC100038986 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257535 GeneID:100038986
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472093.1

name	LOC619808 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82906977 GeneID:619808
definition	codon_start : 1 product : hypothetical protein protein_id : XP_889274.1

name	Rkhd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257537 GeneID:108797 MGI:1918252
definition	codon_start : 1 product : ring finger and KH domain containing 3 protein_id : XP_620516.3

name	Tmc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665719 GeneID:233424 MGI:2669033
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : transmembrane channel-like gene family 3 protein_id : NP_808363.3

name	Stard5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21218432 CCDS:CCDS21411.1 GeneID:170460 MGI:2156765
definition	GO_function : GO:0015485 - cholesterol binding [Evidence IEA] [Evidence ISS]; GO:0017127 - cholesterol transporter activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : 18B7-T7(GS); StAR-related protein 1-4E; StAR-related protein p3-15E/p3-16E product : StAR-related lipid transfer protein 5 protein_id : NP_075866.2

name	Il16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138550 CCDS:CCDS21412.1 GeneID:16170 MGI:1270855
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0050930 - induction of positive chemotaxis [Evidence IDA]; GO:0030595 - leukocyte chemotaxis [Evidence IDA] codon_start : 1 product : interleukin 16 protein_id : NP_034681.2

name	1700026D08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312972 CCDS:CCDS21413.1 GeneID:75556 MGI:1922806
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC75556 protein_id : NP_083611.1

name	Mesdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507648 CCDS:CCDS21414.1 GeneID:80889 MGI:1891420
definition	codon_start : 1 product : mesoderm development candidate 1 protein_id : NP_109630.1

name	Mesdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543247 CCDS:CCDS21415.1 GeneID:67943 MGI:1891421
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007498 - mesoderm development [Evidence NAS] codon_start : 1 exception : mismatches in translation product : mesoderm development candiate 2 protein_id : NP_075892.2

name	9930013L23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38638700 CCDS:CCDS21416.1 GeneID:80982 MGI:2443629
definition	codon_start : 1 exception : mismatches in translation note : transmembrane protein 2-like product : hypothetical protein, 12H19.01.T7 protein_id : NP_109653.2

name	2210412D01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526906 CCDS:CCDS21417.1 GeneID:70178 MGI:1917428
definition	codon_start : 1 product : hypothetical protein LOC70178 protein_id : NP_598483.1

name	Arnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328095 GeneID:11864 MGI:107188
definition	GO_component : GO:0005634 - nucleus [Evidence NAS] [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0017162 - aryl hydrocarbon receptor binding [Evidence IPI]; GO:0005061 - aryl hydrocarbon receptor nuclear translocator activity [Evidence ISS]; GO:0003677 - DNA binding [Evidence IDA]; GO:0046982 - protein heterodimerization activity [Evidence ISS] [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence ISS]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0007417 - central nervous system development [Evidence IMP]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IEP]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001666 - response to hypoxia [Evidence TAS]; GO:0009636 - response to toxin [Evidence TAS]; GO:0009410 - response to xenobiotic stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence NAS] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : aryl hydrocarbon receptor nuclear translocator 2 protein_id : NP_031514.2

name	LOC619909 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257538 GeneID:619909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins product : similar to Hmgb1 protein pseudo : _no_value transcript_id : XR_030581.1

name	A530021J07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149257539 GeneID:330578 MGI:3687211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : Riken cDNA A530021J07 gene transcript_id : XR_035179.1

name	EG666160 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94380781 GeneID:666160 MGI:3643208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG666160 pseudo : _no_value transcript_id : XR_001840.1

name	LOC666170 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257540 GeneID:666170
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 865 ESTs, 12 Proteins product : similar to kappa-B motif-binding phosphoprotein - mouse pseudo : _no_value transcript_id : XR_030638.1

clone name	MSMg01-303N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147P13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-353J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-172A15.T7 (MSMg01no172_a15.b1)	MSMg01-172A15.TJ (MSMg01no172_a15.g1)
ACC	AG368079	AG368080
length	1,107	830
length of high quality (start - end)	---	200 (73 - 272)
definition	CHROMAT_FILE: MSMg01no172_a15.b1 PHD_FILE: MSMg01no172_a15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:42:24 2005	CHROMAT_FILE: MSMg01no172_a15.g1 PHD_FILE: MSMg01no172_a15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:42:24 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ATAAAATATTTAGTGNCCCCGGTTAATACAGAACTCATCTACAATGGCGA TGAGAGATTCGCGCGCGTAATTCCTAGTCAATGTTTGACCCTATGACGGG GGGAACAGAGCTATTAGAGAGATTCAGGTATATATATGTGAATAGGGTTT ATACCTACATGTACTACCCTACTAACATCTGAAGTCTACTTTTCCTCCGA TACAACCACAATGTATCTATTATAACTGATGCACTGTGCCATGTGATCAT GCAACGATGTGTTATGCCCCACCCAGAGTGGTTGGTTGCAGCTTGAGGCG CTGATTATATCCTCACCGCAGAACCCCACGAGCCATGTTCAATAAGGTGA ACATACAAAAGCAGCAAACAAAGTAGAAGATAATTTATAATAAACGGCCA GAATAAACATTAAACAACACCTATATTTTTTTATTTCTCAAATATATAAT ACCGCACATTATTACACAGTAAATCAGATAATTATTTATTTTTTTTTTTT TTCCCCCCCCCCCACCCGCCGCCGGTCGGGTTTTTGGTGGTGTAAATCGT AATAATACGTCGCGGAGGTGTAATCACTCTCATAGAACATATAAATAATA ATATTAATAAATGAGGCGCGGGGGAGGAGGAGGTTAACCTGCGCTGAGAT AGATACTGTGCGAAGATATAGTTGCTACACAAAATCAATGTTTCGTGTGG TTGTAATGCATGTAGACATAACATCACGAGCAAGAGTTATTATGGTCGAG AAGAGGACGATCGTCGAGGCAGGGGCGAGGAGGTGATGATGAGCGCCACA ATTGATTGATGTCGGGAGCGCGGCTCATGCTAAGACAGTGATTGCGGACA AAAGTCCGTACATACTCACGCCCATATAATACCGCAGTAACCATTGACGC GCGCATACATTCAAAATAAGCATATATAATACGGCCGCCGCTCCTGCTCT ATAATAAATTTCATGTTAAACCCGTAACCCCCGGTAGTGCGAACCTGCCC CCCTGCAAATCAATATGACTGACCCCCCCCACAATTACACATTGATCGTC ATACAATTACTGCCCAACTACTGTAGGTGGCTGTTATATCATAGCAAGCG CCACTAN	TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXACAATAAAGCATCAGCAGCCTGCAGGGC AGGGTTCTGCAGTCGATTTCCCCCCCTGTCTTATATGCACTTTTAACACC GTGTCCTCACTTGGTCTTGAGGAGGCTAGGTAGGGAGAGAGACAAAGCTC TGGAGGAGGGGAAGGAGGAAGGACAGGAGAGAGAGGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGATATCCCTCCCTCTCCCTCCTCTTCCCGTTCT GGGTTTTCTTTNTCCCCCCNTTTTTTTTTTTTTTCTCATCTTCCTCCCCT ATCTNTNNTTTTTTTTTTGCCTCCCCAGGACANANCCCCGGGNGTTTTTT GGTGGTTTTATTAGGGTTTTTGGCCCCCCCCCAAAAAAAAAAAAAAAACC CTTGTGGGGGGGGGGGGTGGTTTTCCCCCCCTTCTCCCTCCCTCTTCCTT CTTCTTTTCTTTCTTTTCATTGTTTCCCCCCTTTTCCTCTCTTTTTTTAA TTATCCCCCTCCTTCTCCACCTCCCTTCCCCTCCCTTTTACTTCCTTTCC TTCCCCCCTCCCTTTTTCCCCTTTTTTTTCCTCCCTCCCCCCCCCTTCCT TATTCTTTTCCCTTTACATCTCCCTTCCTTATCTCTCCCTTACCCCTTCT TTCCCTTCTTCTCTCCCTTCCTTTCCATTTCGTTCTTCTTTTTCCCCCCT TTCCCCCCTCTTTTTTTTCTCCCGCTCCTACTCTTTCTTCCTCCCCGTTT TGTTCTTCCTGTCCTTCTTTCTGCCCGCTG
quality values	Open. Hide. 8 8 10 11 10 8 8 8 10 10 12 8 8 8 3 0 3 7 8 8 8 8 8 8 8 10 10 10 8 7 6 6 6 9 9 10 10 10 8 11 6 6 6 6 10 10 10 10 10 6 6 6 13 7 8 8 8 8 7 6 6 6 8 8 8 8 8 8 8 11 16 18 15 9 19 9 9 9 10 9 9 9 9 6 9 9 9 12 9 9 8 8 10 8 8 8 8 8 8 8 8 8 9 6 10 6 8 8 8 7 6 8 6 6 8 8 7 6 8 7 7 8 12 8 8 8 8 10 10 8 8 8 12 8 10 7 7 6 6 7 10 8 8 8 10 8 6 6 8 8 8 8 8 8 8 8 6 6 10 10 7 6 8 8 8 8 6 6 6 6 8 8 8 8 8 8 10 10 10 8 9 8 8 8 8 6 6 7 6 8 8 8 8 8 8 8 15 10 10 10 10 10 10 8 6 6 8 8 9 10 9 9 8 8 8 8 8 8 11 10 10 6 6 8 6 6 8 8 6 6 8 10 6 6 8 6 9 8 8 8 12 12 7 6 8 8 9 12 10 10 8 8 6 8 6 6 6 8 10 11 13 9 9 9 9 9 10 10 10 10 10 8 8 6 6 10 6 6 8 8 8 8 8 8 8 8 9 8 8 6 6 8 8 8 8 8 8 8 6 6 6 8 8 10 10 11 16 15 11 11 11 8 8 8 8 11 8 8 8 8 8 8 10 10 8 8 9 10 9 9 8 8 10 6 6 6 6 8 6 6 8 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 7 7 8 8 8 8 12 11 10 9 9 9 10 10 10 11 11 11 12 12 14 14 9 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 6 8 8 9 9 8 8 8 9 8 8 10 8 8 8 8 10 8 8 8 8 12 9 8 8 8 8 22 20 10 9 9 8 8 8 11 11 11 11 10 10 8 8 8 8 8 8 10 10 12 7 6 6 6 8 8 10 8 8 6 6 8 6 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 11 11 11 11 11 16 8 8 8 10 9 12 25 24 22 11 10 10 10 9 9 12 13 14 13 16 12 12 12 12 10 10 11 11 11 17 9 9 8 8 7 10 8 7 10 10 9 8 8 13 13 13 13 13 10 10 10 8 8 8 8 8 8 12 10 9 10 10 10 8 8 6 6 8 6 6 8 7 7 8 8 8 8 8 8 8 11 12 8 8 6 8 6 6 6 8 8 8 10 11 8 8 8 8 9 9 8 8 8 8 8 8 8 11 8 9 12 9 9 12 7 7 6 6 9 8 8 12 10 9 9 9 9 9 10 10 8 8 8 8 11 8 11 10 6 6 7 7 12 10 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 10 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 11 10 10 8 8 8 8 8 8 8 8 8 8 8 10 8 13 12 8 8 6 6 6 6 6 8 11 8 10 6 6 6 6 8 8 8 8 7 7 8 9 10 8 10 8 8 8 8 8 8 8 8 6 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 12 10 9 9 9 9 9 8 8 8 8 8 10 12 8 8 8 8 10 8 8 8 9 8 8 6 6 8 8 8 8 8 8 8 8 6 8 8 8 6 6 8 8 8 10 9 8 8 8 10 6 6 8 8 6 6 8 8 8 8 6 6 7 7 6 8 8 8 8 8 6 6 6 6 8 8 8 8 6 6 6 6 8 8 9 10 10 10 10 9 9 8 8 8 8 8 6 6 12 10 9 9 9 8 8 8 8 8 8 8 8 6 6 6 6 6 7 10 9 9 8 8 8 8 8 8 8 8 6 6 8 8 9 13 10 15 10 10 9 11 8 6 6 8 8 6 6 6 6 8 8 8 6 7 6 6 8 8 8 8 8 6 6 6 6 8 8 8 8 6 6 7 7 7 8 12 11 13 11 11 10 8 8 6 6 6 6 6 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 6 6 6 8 8 8 8 8 10 10 11 11 11 11 10 13 9 9 8 8 7 8 8 8 9 10 10 10 8 8 8 8 8 8 8 10 14 8 8 8 8 7 6 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 8 7 6 8 8 8 8 8 8 13 11 10 8 8 8 8 8 6 6 8 13 11 12 11 11 16 17 17 10 10 8 8 8 6 6 10 10 15 10 8 8 9 8 6 6 6 6 8 8 9 9 8 13 15 10 13 8 8 10 12 8 10 8 8 8 8 8 8 8 7 8 7 8 8 8 8 8 8 8 10 8 11 8 8 8 6 6 6 8 8 8 8 6 6 6 6 8 8 8 11 9 3 0	Open. Hide. 8 10 8 8 9 19 19 33 28 28 36 37 39 57 48 48 57 57 57 57 53 53 48 57 57 53 53 48 48 30 30 18 17 23 21 21 29 30 29 24 29 14 14 14 19 32 36 50 42 32 32 30 24 17 30 34 59 42 41 41 40 41 41 42 42 42 38 37 42 42 48 48 50 50 47 47 47 48 48 57 57 48 47 47 43 41 41 41 46 48 54 59 57 57 57 57 48 48 47 47 47 47 47 57 27 19 8 9 9 15 19 8 10 10 21 21 47 47 47 59 33 33 14 14 12 27 27 59 59 59 39 44 50 47 47 50 48 48 57 59 59 59 59 59 50 50 50 53 53 50 57 57 48 48 48 57 57 57 57 57 57 57 57 54 54 57 57 50 54 54 54 54 54 54 57 57 57 59 57 48 48 48 57 57 57 57 57 57 57 57 57 57 47 43 43 47 57 59 59 59 59 54 54 54 57 57 44 46 40 44 44 48 57 57 57 57 57 57 57 57 57 57 48 47 47 47 57 48 48 54 48 48 57 57 54 54 48 57 48 48 48 59 59 59 59 59 59 59 57 57 57 57 57 57 48 48 48 48 47 48 48 48 43 47 34 29 15 15 11 15 12 13 18 16 17 19 16 18 12 12 10 15 8 8 8 10 10 10 12 10 10 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 15 3 0 3 12 19 23 23 23 3 0 3 19 16 30 20 11 9 9 9 9 9 9 9 12 22 22 11 11 12 12 12 9 9 13 22 23 19 21 9 9 9 10 13 3 0 3 0 0 3 16 19 6 6 6 8 7 7 6 6 6 6 9 10 10 10 9 3 3 3 3 9 3 0 3 0 3 13 12 8 8 7 3 0 3 10 13 17 10 10 8 8 8 10 8 8 12 22 15 9 9 9 9 9 9 9 9 12 15 11 17 11 11 11 11 15 18 15 15 11 12 10 10 9 9 10 11 11 15 18 11 11 11 11 11 19 10 8 8 8 8 8 10 9 9 9 7 8 8 11 12 12 17 13 13 9 8 8 8 8 8 8 9 9 10 10 13 19 21 11 10 12 10 15 8 8 8 11 13 10 8 8 6 6 10 8 10 10 16 19 16 11 16 16 20 14 15 8 10 13 10 8 8 10 10 12 16 15 8 8 8 8 8 8 13 8 9 10 8 20 20 12 10 8 8 8 8 15 15 22 20 28 21 24 24 16 13 10 9 9 9 9 11 12 11 13 10 10 10 10 13 18 12 15 15 15 8 13 8 6 6 8 10 10 9 11 20 19 12 11 12 9 9 9 11 10 16 9 11 8 8 8 8 10 10 10 15 13 11 11 15 15 15 18 15 19 18 13 9 10 9 11 10 25 18 27 15 15 12 17 13 15 15 17 20 27 32 37 36 22 17 11 10 10 13 13 10 10 10 10 10 10 15 18 25 19 24 21 19 13 8 6 6 8 8 8 10 10 10 19 17 19 13 10 8 8 10 10 9 8 11 22 11 11 11 17 16 14 13 13 10 10 9 7 7 9 7 7 11 12 9 9 9 9 8 8 8 8 8 8 8 11 15 12 14 14 14 10 13 8 8 8 8 8 8 10 13 15 21 11 14 9 8 8 8 10 12 12 9 9 9 11 9 9 13 11 10 10 10 10 9 9 9 9 9 9 9 13 15 13 12 12 10 15 19 19 28 31 28 20 20 18 22 25 25 25 19 21 14 13 13 8 8 8 8 6 10 10 8 8 9 8 8 8 10 9 12 10 12 12 14 11 12 12 8 8 8 8 8 6 7 6 6 8 12 10 8 8 10 7 8 8 8 8 12 11 15 12 10 9 9 8 8 8 8 12 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no172_a15.g1 MSMg01no172_a15.g1 CHROMAT_FILE:
MSMg01no172_a15.g1 PHD_FILE: MSMg01no172_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:24 2005
         (200 letters)



>mm_chr7_90689555_90690153
          Length = 599

 Score =  294 bits (152), Expect = 2e-84
 Identities = 182/192 (94%), Gaps = 2/192 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaataaagcatcagcagcctgcagggcagggttctgcagtcgatttccccccctgtctt 60
           |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 201 acaataaagcatcagcagcctgcagggcagggttct-cagtcgatttctcctcctgtctt 259

                                                                       
Query: 61  atatgcacttttaacaccgtgtcctcacttggtcttgaggaggctaggtagggagagaga 120
           ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 260 atatgcacttttaacaccgtgtcctcacttggtctcgaggaggctaggtaggaagagaga 319

                                                                       
Query: 121 caaagctctggaggaggggaaggaggaaggacaggagagagaggagagagagagagagag 180
           |||||||||||||||||||||||||||||||||||||| ||||||| | | | |||||||
Sbjct: 320 caaagctctggaggaggggaaggaggaaggacaggagaaagaggaggggggg-gagagag 378

                       
Query: 181 agagagagagag 192
           ||||||||||||
Sbjct: 379 agagagagagag 390


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 599
Length adjustment: 8
Effective length of query: 192
Effective length of database: 591
Effective search space:   113472
Effective search space used:   113472
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information