Query= MSMg01no174_g09.b1 MSMg01no174_g09.b1 CHROMAT_FILE:
MSMg01no174_g09.b1 PHD_FILE: MSMg01no174_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:15 2005
(313 letters)
>mm_chr7_79307382_79308094
Length = 713
Score = 598 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 5 gaattccagacaatgagcagaaagaaagacagctaattccatatggggtaagatgcaagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagacaatgagcagaaagaaagacagctaattccatatggggtaagatgcaagc 264
Query: 65 acaccctaaatttaaacccagagagtaacctcagccctaggggaatctgaggctaggagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaccctaaatttaaacccagagagtaacctcagccctaggggaatctgaggctaggagc 324
Query: 125 ttccttagaccactgggaaatcccttcatccagtgaacgagcagaaagcacttgtcctca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccttagaccactgggaaatcccttcatccagtgaacgagcagaaagcacttgtcctca 384
Query: 185 tctgtgaaggggagaaagagaaatgccaccagtgaaagggacaaaggcattgagggtgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgtgaaggggagaaagagaaatgccaccagtgaaagggacaaaggcattgagggtgtc 444
Query: 245 tcttttaaagaactcctcagcgcactgcagagctcacaccccctccttcctcccaagaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcttttaaagaactcctcagcgcactgcagagctcacaccccctccttcctcccaagaat 504
Query: 305 atggaatat 313
|||||||||
Sbjct: 505 atggaatat 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_g09.g1 MSMg01no174_g09.g1 CHROMAT_FILE:
MSMg01no174_g09.g1 PHD_FILE: MSMg01no174_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:15 2005
(239 letters)
>mm_chr7_79444817_79445455
Length = 639
Score = 418 bits (216), Expect = e-121
Identities = 227/234 (97%), Gaps = 6/234 (2%)
Strand = Plus / Minus
Query: 4 aaactctcttaaaggaaaagtagagcagagctggctgaagcaggggtgtgaacagggaga 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaactctcttaaaggaaaagtagagcagagctggctgaagcaggggtgtgaacag----- 439
Query: 64 ccgtggaaggctaaatttccgaatctgattccgtaaatatgtcatatcattttcatatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 -tgtggaaggctaaatttccgaatctgattccgtaaatatgtcatatcattttcatatgt 380
Query: 124 aaatccttcatttttctcaagtaaatcatctatttcataaaatcacatatatattttaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaatccttcatttttctcaagtaaatcatctatttcataaaatcacatatatattttaat 320
Query: 184 gcaacacagattgaacagtggcgattttttgtggctgctaacaccttttagctc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcaacacagattgaacagtggcgattttttgtggctgctaacaccttttagctc 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
