Query= MSMg01no174_p08.b1 MSMg01no174_p08.b1 CHROMAT_FILE:
MSMg01no174_p08.b1 PHD_FILE: MSMg01no174_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:56 2005
(314 letters)
>mm_chr7_85540071_85540784
Length = 714
Score = 509 bits (263), Expect = e-148
Identities = 296/307 (96%), Gaps = 2/307 (0%)
Strand = Plus / Minus
Query: 8 ttcaagaccagccttgactacct-agtgagttccaagccaccatggctttaatgagattt 66
|||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||
Sbjct: 582 ttcaagaccagccttgacta-ctcagtgagttccaagtcaccatgggtttaatgagattt 524
Query: 67 tgtctgcaaatatttttttaagaggaagatttacttccagcctgggtttgtaagctttaa 126
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 523 tgtctgcaaatatttttttaagaggaacatttacttccagcctgggtttgtaagctttaa 464
Query: 127 ccccagggaaatcatcatatcaagattaatttctctgattttatggctgaatgggatgat 186
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 463 ccccagggaaatcatcatatcaagattaatttctctaattttatggctgaatgggatgat 404
Query: 187 tgaggaaatcagagattttccttggtcaagtcccaggggtgccaggtcatgtatagccat 246
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 403 tgaggaaatcaaagattttccttggtcatgtcccaggggtgccaggtcatgtatagccat 344
Query: 247 ggatgccatcctgtactggtaaagatgaccctggaaatggtacttactgctctcccctat 306
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 343 tgatgccatcctgtactggtaaggatgaccctggaaatggtacttactactctcccctat 284
Query: 307 gattagg 313
|||||||
Sbjct: 283 gattagg 277
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_p08.g1 MSMg01no174_p08.g1 CHROMAT_FILE:
MSMg01no174_p08.g1 PHD_FILE: MSMg01no174_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:56 2005
(657 letters)
>mm_chr7_85401228_85402284
Length = 1057
Score = 1214 bits (628), Expect = 0.0
Identities = 649/656 (98%), Gaps = 3/656 (0%)
Strand = Plus / Plus
Query: 1 ctgcagaccaggcccatatttattttgaaataaggacattctccaaaacatatgaagaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 200 ctgcagaccaggcccatatttattttgaaataaggacattctccaaaaaatatgaagaaa 259
Query: 61 taattgcttcttacaaaaa-caatgtataagccagcaagatggctcagag-gaaaaaggc 118
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||
Sbjct: 260 taattgcttcttacaaaaaacaatgtataagccagcaagatggctcagagagaaaa-ggc 318
Query: 119 gcttgtcatcaagcctgaagatatgagttgaatcccctggactcatgtggtagaagaaga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcttgtcatcaagcctgaagatatgagttgaatcccctggactcatgtggtagaagaaga 378
Query: 179 taatcaactcctgaaagttgtactctggtatccacacacaggtactgtgcctacacacat 238
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 379 taatcaactcctgaaagttgtactctggtctccacacacaggtactgtgcctacacacat 438
Query: 239 gcacacatacatacaaataaaatgtatgatcaatatagatttatgtcagtcatggtgaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcacacatacatacaaataaaatgtatgatcaatatagatttatgtcagtcatggtgaca 498
Query: 299 catgtctataatcctagcactaagaaggcagaggtaggaggatcaccataagtctgagat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 catgtctataatcctagcactaagaaggcagaggtaggaggatcaccataagtctgagat 558
Query: 359 cagacagggctacatagaaaattccaggtcagccagggctatagagtagaaacccacctc 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tagacagggctacatagaaaattccaggtcagccagggctatagagtagaaacccacctc 618
Query: 419 aaaagagatgaaaataaaaataaaagccaacaacatagacaaaaaagaagataaaaaaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaagagatgaaaataaaaataaaagccaacaacatagacaaaaaagaagataaaaaaga 678
Query: 479 cagaaatctaaaagaacaaaaatgagaaaccaacttggtgtcttggaaattaaccacatg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cagaaatctaaaagaacaaaaatgagaaaccaacttggtgtcttggaaattaaccacatg 738
Query: 539 gtcaccaaagtttaaaaaaaatattccacagatggaaatagatgtcttgtgtactgtaaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtcaccaaagtttaaaaaaaatattccacagatggaaatagatgtcttgtgtactgtaaa 798
Query: 599 agccttgagggtgactctggactgaacactgaatgacagagagagggtaaatagac 654
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 agcctcgagggtgactctggactgaacactgaatgacagagagagggtaaatagac 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
