Query= MSMg01no175_c21.b1 MSMg01no175_c21.b1 CHROMAT_FILE:
MSMg01no175_c21.b1 PHD_FILE: MSMg01no175_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:12 2005
(332 letters)
>mm_chr7_126018164_126018895
Length = 732
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Plus
Query: 4 ggaattctctttgctaacgtttgttttatctgtttacagaagagtcactgggatgggtgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctttgctaacgtttgttttatctgtttacagaagagtcactgggatgggtgg 263
Query: 64 ggagccaaggggacatgctggtgtgaagggaagttttttaatcgtcaagaaagaacaaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagccaaggggacatgctggtgtgaagggaagttttttaatcgtcaagaaagaacaaca 323
Query: 124 gcccatggggaaatgtgggcagcagccatgtttcactttgccctcatagtggcattgcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcccatggggaaatgtgggcagcagccatgtttcactttgccctcatagtggcattgcct 383
Query: 184 ttctccctctcattcctataatgcccagcaagtctgagtgccaagccctttggaattctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctccctctcattcctataatgcccagcaagtctgagtgccaagccctttggaattctg 443
Query: 244 ctgagaagaaggctctgtgccctctagggctgcttccttcagtggcttccctcactttct 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgagaagaaggccctgtgccctctagggctgcttccttcagtggcttccctcactttct 503
Query: 304 ctcttgatcatctac 318
|||||||||||||||
Sbjct: 504 ctcttgatcatctac 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_c21.g1 MSMg01no175_c21.g1 CHROMAT_FILE:
MSMg01no175_c21.g1 PHD_FILE: MSMg01no175_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:12 2005
(626 letters)
>mm_chr7_126156639_126157663
Length = 1025
Score = 1123 bits (581), Expect = 0.0
Identities = 602/609 (98%), Gaps = 1/609 (0%)
Strand = Plus / Minus
Query: 18 gtaaaaaagcaggtgatctgtgcctgtcacccacttcttactcgtggggacatgaggatc 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gtaaaaaagcaggtgatctgtgcctgtcacccacttcttactcgtggggacatgaggatc 966
Query: 78 tttgaagctcactggccagccattctaaccaattctatgagcttcaggtttagtgagagg 137
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 965 tttgaagctcactggccagccattctaaccaattctatgagcttcaagtttagtgagagg 906
Query: 138 tcttgtcccaaaagccaaatggagaacaaatgagccaagatgcataacctctgaccccca 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tcttgtcccaaaagccaaatggagaacaaatgagccaagatgcataacctctgaccccca 846
Query: 198 cacatgtacatacatatacatctaagctaacaggtatatacaatacaacacactcaagag 257
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 cacatgtacatacgtatacatctaagctaacaggtatatacaatacaacacactcaagag 786
Query: 258 agacatgagaggacacagaaagccataggaaagaagaccatgtaaacatgaaggacggca 317
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 785 agacatgagaggacacagaaagccatagggaagaagaccatgtaaacatgaaggacggca 726
Query: 318 ccagagaaagtcagccacaagtcaaaagacacagatggcattctcccaaaaacctttgaa 377
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 725 ccagagaaagtcagccacaagtcaaaagagacagatggcattctcccaaaaacctttgaa 666
Query: 378 aagaatagggcccagccagtccagagatgagtccatttgaaggtcgtacctggtccccag 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aagaatagggcccagccagtccagagatgagtccatttgaaggtcgtacctggtccccag 606
Query: 438 ttcctccatctctcttcgcttcctgtctgccttgttgtagacagcctactccccccacat 497
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 605 ttcctccatctctctttgcttcctgtctgccttgttgtagacagcctact-cccccacat 547
Query: 498 actcctgccaccatgacacgctgactcattcatggaccaaagataagtgatcacggacca 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 actcctgccaccatgacacgctgactcattcatggaccaaagataagtgatcacggacca 487
Query: 558 aatcttctagaacatgaactaaaaatgatcttcttataacggttggtcttgcttttcaac 617
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 486 aatcttctagaacatgaactaaaaatgatcttcttataatggttggtcttgcttttcaac 427
Query: 618 ttggctgaa 626
|||||||||
Sbjct: 426 ttggctgaa 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
