Query= MSMg01no177_h16.b1 MSMg01no177_h16.b1 CHROMAT_FILE:
MSMg01no177_h16.b1 PHD_FILE: MSMg01no177_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:04 2005
(232 letters)
>mm_chr7_20304671_20305301
Length = 631
Score = 275 bits (142), Expect = 2e-78
Identities = 160/166 (96%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 1 atggtgctgaaaaccctgtaaaaaccagcatctcctacctaccatcaagtggacaggctg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 365 atggtgctgaaaaccctgtaaaaaccagcatctcctacctaccatcaagtggccaggctg 306
Query: 61 gcaggaagggccagtgtgaccagtcctttgttcctctggtagagagaaccagaggcacgt 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 305 gcaggcagggccagtgtgaccagtcctttgttcctctggtagagagaaccagaggcacct 246
Query: 121 cctgtaataggaggaactggggaggggggctaacctcccactgatc 166
||||||| ||||||||||||| |||||| |||||||||||||||||
Sbjct: 245 cctgtaagaggaggaactgggaaggggg-ctaacctcccactgatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 631
Length adjustment: 9
Effective length of query: 223
Effective length of database: 622
Effective search space: 138706
Effective search space used: 138706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no177_h16.g1 MSMg01no177_h16.g1 CHROMAT_FILE:
MSMg01no177_h16.g1 PHD_FILE: MSMg01no177_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:04 2005
(277 letters)
>mm_chr7_20148267_20148943
Length = 677
Score = 528 bits (273), Expect = e-154
Identities = 276/277 (99%)
Strand = Plus / Plus
Query: 1 caaaggctcgggatgaaccagctgaccaaacctgagcgagcctaagccacacctccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaggctcgggatgaaccagctgaccaaacctgagcgagcctaagccacacctccaagg 260
Query: 61 ggtcgattccaaagctcaggattcatctgggcactttcgcttttccttctcagctcatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcgattccaaagctcaggattcatctgggcactttcgcttttccttctcagctcatta 320
Query: 121 aagcccactggcacagggactgaaaccacagaacgggatttgaggagggtcaagcacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 aagcccactggcacagggactgaaaccacagaacgggatttgaggagggtcgagcacagc 380
Query: 181 attgccaagtagagagctaggctggaactggagggaggctccagtgtgaactgataactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgccaagtagagagctaggctggaactggagggaggctccagtgtgaactgataactg 440
Query: 241 agaccactgctaagggtagctgctttcctcttcacag 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaccactgctaagggtagctgctttcctcttcacag 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
