Query= MSMg01no177_n15.b1 MSMg01no177_n15.b1 CHROMAT_FILE:
MSMg01no177_n15.b1 PHD_FILE: MSMg01no177_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:30 2005
(366 letters)
>mm_chr7_129127126_129127893
Length = 768
Score = 671 bits (347), Expect = 0.0
Identities = 360/365 (98%), Gaps = 2/365 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcttgttgtcctgccacttttctgcccagctgcatttatttttgcttcaggt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcttgttgtactgccacttttctgcccagctgcatttatttttgcttcaggt 263
Query: 64 tcttcagggctctgatattaggtatatgtgcatttgaaacttttatcttccttaagtact 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 tcttcagggctctgatattaggtatatgtgcatttgtaacttttatcttccttaagtact 323
Query: 124 aacctaatatcatcatcaagtacacctttatctctgaaacaaagcttgttctctggttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacctaatatcatcatcaagtacacctttatctctgaaacaaagcttgttctctggttta 383
Query: 184 cctggctaattttttgagtatattttctttgtgctatgtgtccactggtgtcattgaggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctggctaattttttgagtatattttctttgtgctatgtgtccactggtgtcattgaggc 443
Query: 244 ccaggctatttttgttgttgttgtttcttcttttaagattt--tttttaaaagatttaat 301
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 444 ccaggctatttttgttgttgttgtttcttcttttaagatttatttttttaaagatttaat 503
Query: 302 tatgtgtatatatgcatatctctgtgtgggtttggtcacttatgaatggatgtacccaga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatgtgtatatatgcatatctctgtgtgggtttggtcacttatgaatggatgtacccaga 563
Query: 362 gtcca 366
|||||
Sbjct: 564 gtcca 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 768
Length adjustment: 9
Effective length of query: 357
Effective length of database: 759
Effective search space: 270963
Effective search space used: 270963
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_n15.g1 MSMg01no177_n15.g1 CHROMAT_FILE:
MSMg01no177_n15.g1 PHD_FILE: MSMg01no177_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:30 2005
(592 letters)
>mm_chr7_129289499_129290490
Length = 992
Score = 630 bits (326), Expect = 0.0
Identities = 338/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 252 ctttaaaaataggtagcagagggctggagaaatgccttggcagttaagagcagcactaac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 ctttaaaaataggtagcagagggctggagaaatgccttggcagttaagagcagcactaac 930
Query: 312 tgttcttacaga-gtcctaggttcagtaccaacacccacatgacagctaacaaccatgtg 370
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 929 tgttcttacagaggtcctaggttcagtaccaacatccacatgacagctaacaaccatgtg 870
Query: 371 taactctaggtctgggtgcttcatgcatgtagtgcagagatatgtgcaggcaaggacaca 430
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 869 taactctaggtctgggtgcttcatgcatgtagtgcagagatatatgcaggcaaggacaca 810
Query: 431 gacacataaaataaaaagttagcaaagttttcaacatttatacccctgtacttataaatc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gacacataaaataaaaagttagcaaagttttcaacatttatacccctgtacttataaatc 750
Query: 491 aacttctaagaatgtatgtcagagataactgtgcccaattgtacaatacatgtaaaacaa 550
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 749 aacttctaagaatgtatgtcagagataactgtgcccaattgcacaatacatgtaaaacaa 690
Query: 551 tgtcaggacagcagtttctaatagtgcccaggttcaccgttt 592
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 tgtcaggacagcagtttctaatagtgcccaggttcaccgttt 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
