TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTCCCATCCCACTGACTTCACTCAACTGTTGAAAGGATAACATG
ATGATAGGTGCGATGATAGGTGCTTTATTTCTGTGAGCATCCCACATCAA
AAGATTGTGTTTCCTTTCTCTTGATGGCTTCAAAAGCTTAATAACTGCTT
CCAGTCCACACTCCCTATGCACAGCTCCCTATGCACACTCCCTTTACACC
TCTTGCTTACCAACCTCACTGAATTTGCTGAAAGTCACTTGACTTCTGAA
CTTCAGACTTGACTTCAGACTTTCCCTCTGAAGTGCGAAAAATCTCTTCT
CTCCTCTGTTTTACCCAGAGGCTTTCAGTCTTATCACCTTGCAGGTTATC
CTGTAAAACGAAATGCCATTTTCATTCAAACTGAAGAGTTTAAAGTTTTA
GGACATCCATCCATACATACATACACACACACACACACACACACACAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGTTTCTTTTTTTTTTCTCCCCCCCCCCCCCTTTTCCCTATTTT
TTTATCCCTTTTCCTTTCTTTCCCCCTTTTTTTTTCCCATTACCATTTTT
TATCCTTCACCTCACTAACACGACCCTTAATGATTCATCTTTTATCTCAC
TCCTTN

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGGTGAGATGGGGGTTGAGGGATGG
GGACATCCTCTTGGAGACTGCCTCGGGAGGAGAAATGGGATGGGGAGCTG
TTCGGAGTCCACCTCCCTCTCTCGTCTCCCTGCCTGTTCCCTCCCCGCTG
CTCTCCCACTACCACCTACCTCCCTACGCCTCCTTACCGCTACCACTTAC
CCTCCCTGTTCATACTTTGCTATCATGACCCCCTCCCTCCTTCCCTCCGC
TTGTTCCCCCCCTCTCCTCTTTTTTTCTTTCCCCCCTCCCCCCCCCCTCC
CCACTCCTCTCTTTTTTTTTCCCCCCCCCCCCCCCCCCCGTGTTCCCAAT
AATATTTTCCTTTCTCCCCCCCCCCCCCCTTTTTTATTTTTCTCCCCCCT
TCTCTCCCCCTCCTTCCCCTCCCCCCTCCCCTCTCCCTCTTCCCCCCTCT
NCCCCTCCCCACACTTCACGCTTCTCTCCTCTTCCTCTCTTCCTTTCCTC
CCCCTTTTTTTTCTTTTTCTCCCCTCCCCCCTTCCCCTCTCCCCTCCCCC
CTTTTCTCTCCCTCCCCCGCCCCCCTCTTCCCTTTTCCTTCCTCTTCCTC
TCCTCTCCTTCCCCCCCCCTTCCTCCCTGTTCTACCTATCCTGTTCCTCC
TCCTCGCCCTCCCCGTCTTCCCCCTCCTCCTTTCCCCGCCTCGCTTCCCT
CCCCCCCCTTCTTCCG

Query= MSMg01no178_k14.b1 MSMg01no178_k14.b1 CHROMAT_FILE:
MSMg01no178_k14.b1 PHD_FILE: MSMg01no178_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:30 2005
         (511 letters)



>mm_chr7_59627217_59628127
          Length = 911

 Score =  779 bits (403), Expect = 0.0
 Identities = 472/509 (92%), Gaps = 24/509 (4%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctcccatcccactgacttcactcaactgttgaaaggataacatgatgataggt 64
           |||||||||||||||||||||||||||||||||||||||||||| |||| ||||      
Sbjct: 213 gaattctctcccatcccactgacttcactcaactgttgaaaggagaacacgatg------ 266

                                                                       
Query: 65  gcgatgataggtgctttatttctgtgagcatcccacatcaaaagattgtgtttcctttct 124
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 --gatgataggtgctttatttctgtgagcatcccacatcaaaagattgtgtttcctttct 324

                                                                       
Query: 125 cttgatggcttcaaaagcttaataactgcttccagtccacactccctatgcacagctccc 184
           |||||||||||||||||||| |||||||||||||| ||||              ||||||
Sbjct: 325 cttgatggcttcaaaagctttataactgcttccagcccac--------------gctccc 370

                                                                       
Query: 185 tatgcacactccctttacacctcttgcttaccaacctcactgaatttgctgaaagtcact 244
           |||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 371 tatgcacattccctttacacctcttgcttaccatcctcactgaatttgctgaaaatcact 430

                                                                       
Query: 245 tgacttctgaacttcagacttgacttcagactttccctctgaagtgcgaaaaatctcttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgacttctgaacttcagacttgacttcagactttccctctgaagtgcgaaaaatctcttc 490

                                                                       
Query: 305 tctcctctgt--tttacccagaggctttcagtcttatcaccttgcaggttatcctgtaaa 362
           ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctccactgtgttttacccagaggctttcagtcttatcaccttgcaggttatcctgtaaa 550

                                                                       
Query: 363 acgaaatgccattttcattcaaactgaagagtttaaagttttaggacatccatccataca 422
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acgaaatgtcattttcattcaaactgaagagtttaaagttttaggacatccatccataca 610

                                                                       
Query: 423 tacatacacacacacacacacacacacacagagagagagagagagagagagagagagaga 482
            ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 611 cacacacacacacacacacacacacacacacagagagagagagagagagagagagaaaga 670

                                        
Query: 483 gagagagagagagagagagagagagagag 511
           |||||||||||||||||||||||||||||
Sbjct: 671 gagagagagagagagagagagagagagag 699


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 114
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)