Query= MSMg01no181_b09.b1 MSMg01no181_b09.b1 CHROMAT_FILE:
MSMg01no181_b09.b1 PHD_FILE: MSMg01no181_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:29 2005
(327 letters)
>mm_chr7_98733909_98734636
Length = 728
Score = 590 bits (305), Expect = e-173
Identities = 320/325 (98%), Gaps = 3/325 (0%)
Strand = Plus / Plus
Query: 5 gaattccaa-cacctttcttttttttaa-gtccacacatagagacaataaggtgaccaag 62
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaacacctttcttttttttaaagtccacacatagagacaataaggtgaccaag 264
Query: 63 ataaagaagtacttaccgaacagagctgtggggtggaaagaaacagtaaaaccaggaatg 122
||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 ataaagaagtacttag-gaacagagctgtggggtggaaagaaacaataaaaccaggaatg 323
Query: 123 cataataccagagtctgtttgcaacagagctatcattaaatatgttcatttagagtaaat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cataataccagagtctgtttgcaacagagctatcattaaatatgttcatttagagtaaat 383
Query: 183 ttcattaacaattgcagtgcatggtaagttagcatcataacataactcatctctgagccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcattaacaattgcagtgcatggtaagttagcatcataacataactcatctctgagccc 443
Query: 243 acatgtttccacttggaatctgagccttgtaaaaagtagctatgcaaagctcacagaagc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acatgtttccacttggaatctgagccttgtaaaaagtagctatgcaaagctcacagaagc 503
Query: 303 attttaagtgattctgcttactttt 327
|||||||||||||||||||||||||
Sbjct: 504 attttaagtgattctgcttactttt 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_b09.g1 MSMg01no181_b09.g1 CHROMAT_FILE:
MSMg01no181_b09.g1 PHD_FILE: MSMg01no181_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:29 2005
(527 letters)
>mm_chr7_98876856_98877782
Length = 927
Score = 590 bits (305), Expect = e-173
Identities = 305/305 (100%)
Strand = Plus / Minus
Query: 223 ttttatagaaaccaagaccacctacccagggatagctctgcctaacatgggctgggtcct 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 ttttatagaaaccaagaccacctacccagggatagctctgcctaacatgggctgggtcct 868
Query: 283 accatatcaatcactaattaagaaaatgccttaagtgccctcctacagccctctgtatac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 accatatcaatcactaattaagaaaatgccttaagtgccctcctacagccctctgtatac 808
Query: 343 aggcattttctcagttgagtatctcatttatctccaacgaccctagtttgtgtcaggtta 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aggcattttctcagttgagtatctcatttatctccaacgaccctagtttgtgtcaggtta 748
Query: 403 acataaaactggctaccacagtgatgctcgcccttgatgctgcccatctacttctggaga 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 acataaaactggctaccacagtgatgctcgcccttgatgctgcccatctacttctggaga 688
Query: 463 ctgctaactgacacttctgtgaaatatatctgatataaataagcaggttgttttaaacca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctgctaactgacacttctgtgaaatatatctgatataaataagcaggttgttttaaacca 628
Query: 523 cccac 527
|||||
Sbjct: 627 cccac 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
