Query= MSMg01no181_e23.b1 MSMg01no181_e23.b1 CHROMAT_FILE:
MSMg01no181_e23.b1 PHD_FILE: MSMg01no181_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:45 2005
(504 letters)
>mm_chr7_140856390_140857293
Length = 904
Score = 936 bits (484), Expect = 0.0
Identities = 496/500 (99%)
Strand = Plus / Plus
Query: 5 gaattcccatgcccatttccacttctgatgcttcctccacacttaaggactctgacacta 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccatgcccattttcacttctgatgcttcctccacacttaaggactctgacacta 264
Query: 65 tctatgaggtttaagggtttgcaaaaggacccaaaacttgctgttcctacagcaaaatca 124
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctgtgaggtttaagggtttgcaaaaggacccaaaacttgctgttcctacagcaaaatca 324
Query: 125 gccaaggaagatcaggcgtgccccagaaataaagttcgcattgtgttctcagtgcaggta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccaaggaagatcaggcgtgccccagaaataaagttcgcattgtgttctcagtgcaggta 384
Query: 185 ttactgatctcacctcatcccagcagtgactagcacccaggaagttctaccgcaatgtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttactgatctcacctcatcccagcagtgactagcacccaggaagttctaccgcaatgtgg 444
Query: 245 agtcactgtgtttatttagaatctgggtgcatggtagaacttagcctccaacctctctag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtcactgtgtttatttagaatctgggtgcatggtagaacttagcctccaacctctctag 504
Query: 305 aagataatctgtcactctgcagctcagggactccatagaaattgcactgttttaaagacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagataatctgtcactctgcagctcagggactccatagaaattgcactgttttaaagacc 564
Query: 365 tatagatggccctgacagccatagaggatggctggatctatctatggagattaatccttt 424
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatagatggccttgagagccatagaggatggctggatctatctatggagattaatccttt 624
Query: 425 attcatagcacagcactgcacacactgaatgtgagcagagaacaggagttgaggtgtctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attcatagcacagcactgcacacactgaatgtgagcagagaacaggagttgaggtgtctt 684
Query: 485 gcagtggctgagagatgtag 504
||||||||||||||||||||
Sbjct: 685 gcagtggctgagagatgtag 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_e23.g1 MSMg01no181_e23.g1 CHROMAT_FILE:
MSMg01no181_e23.g1 PHD_FILE: MSMg01no181_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:45 2005
(552 letters)
>mm_chr7_140974083_140975034
Length = 952
Score = 743 bits (384), Expect = 0.0
Identities = 396/400 (99%), Gaps = 1/400 (0%)
Strand = Plus / Minus
Query: 1 attcactgactcattcttggcttccttgggagccgctggaaagcacgagcccctccttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 attcactgactcattcttggcttccttgggagccgctggaaagcacgagcccctccttga 439
Query: 61 atctggttggctgcttcgaaggagacaagtcggaacagcgtttccctggcccagtgaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atctggttggctgcttcgaaggagacaagtcggaacagcgtttccctggcccagtgaggc 379
Query: 121 caaggacaaccaaattagcaggaagcagaggctgtcagggacaagctgggtgacacaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaggacaaccaaattagcaggaagcagaggctgtcagggacaagctgggtgacacaatt 319
Query: 181 tcaaccacggagcctctctgtccctttgtgtggctgactggacatcacaggtcaggactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcaaccacggagcctctctgtccctttgtgtggctgactggacatcacaggtcaggactg 259
Query: 241 ctttgattctcagtattttgatggggatttttaaaataaggctgtctaaacgtgttgctt 300
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 258 ctttgattctcagtgttttgatggggattttaaaaataaggctgtctaaacgtgttgctt 199
Query: 301 taaaaaaa-ttttttttaagtttttaatttgattcatataagcatttccttcttaataag 359
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 198 taaaaaaaattttttttaagtttttaatttgatttatataagcatttccttcttaataag 139
Query: 360 gtttgaattgtaacctaaatgaaataattggtattcttta 399
||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gtttgaattgtaacctaaatgaaataattggtattcttta 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
