Query= MSMg01no181_p14.b1 MSMg01no181_p14.b1 CHROMAT_FILE:
MSMg01no181_p14.b1 PHD_FILE: MSMg01no181_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:35 2005
(386 letters)
>mm_chr7_80586813_80587598
Length = 786
Score = 739 bits (382), Expect = 0.0
Identities = 385/386 (99%)
Strand = Plus / Minus
Query: 1 aggactacctgcccagggatggctgcacctacaatgggctgggccctgccccatgagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aggactacctgcccagggatggctgcacctacaatgggctgggccctgccccatgagtca 710
Query: 61 gtaattaagaaactgccttacaggcttgcctacagctaagtcttaaggagcccagcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gtaattaagaaactgccttacaggcttgcctacagctaagtcttaaggagcccagcctca 650
Query: 121 atggaggctccttctctcagatgacctcagcatgtatcaagtggacataatctagccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 atggaggctccttctctcagatgacctcagcatgtatcaagtggacataatctagccagc 590
Query: 181 acagttgctttcacagtttgtcagcagagtagaacgcgtgcttctccttccaagagttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acagttgctttcacagtttgtcagcagagtagaacgcgtgcttctccttccaagagttta 530
Query: 241 gtttaaggctaaccaaaggctaaaacatgcttacagtgggcatggctgctggccaataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtttaaggctaaccaaaggctaaaacatgcttacagtgggcatggctgctggccaataat 470
Query: 301 catgggacggtacagccatgaatttcttactcaagcatccaatgaaatatggagaagata 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 469 catgggacggtacagccatgaatttcttactcaagcatcaaatgaaatatggagaagata 410
Query: 361 ttttcataatgtgccaaataaagaaa 386
||||||||||||||||||||||||||
Sbjct: 409 ttttcataatgtgccaaataaagaaa 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_p14.g1 MSMg01no181_p14.g1 CHROMAT_FILE:
MSMg01no181_p14.g1 PHD_FILE: MSMg01no181_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:35 2005
(494 letters)
>mm_chr7_80531346_80532239
Length = 894
Score = 897 bits (464), Expect = 0.0
Identities = 484/492 (98%), Gaps = 4/492 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcagagttcc--gaaacaaagattggctaagccagtgtttttctggatggaga 62
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcagagg--caagaaacaaagattggctaagccagtgtttttctggatggaga 262
Query: 63 agtaggaacagtggggaatcccccaggattgattgtgcacccagacttagcttaaattta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agtaggaacagtggggaatcccccaggattgattgtgcacccagacttagcttaaattta 322
Query: 123 catagattatctgaagaaagaaaggtcagatggttccagcctgcagatgagatgcaggta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catagattatctgaagaaagaaaggtcagatggttccagcctgcagatgagatgcaggta 382
Query: 183 ttgtggaggccacaaacaagtgctgattaactactgggtgatcttaaattaaggctgaga 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 383 ttgtggaggccacaaacaagtgctgattaactactgggtgatcttaaattaaggctgaaa 442
Query: 243 gagaaaacacaaatgaagctttgcaggcacaatgcctgaattaatgcatttacaataaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagaaaacacaaatgaagctttgcaggcacaatgcctgaattaatgcatttacaataaca 502
Query: 303 taacccaagcccaggctgctgatagtcacacagggggattgtgagggtctttgtagtttc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taacccaagcccaggctgctgatagtcacacagggggattgtgagggtctttgtagtttc 562
Query: 363 ttagctaacggccacgcagagccagatgctcagaaactgctaacattgggtcagaagtgg 422
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttagctaaaggccacgcagagccagatgctcagaaactgctaacattgggtcagaagtgg 622
Query: 423 tactgaacatcaagccaaaacataacgttcttcccaggctgtaatccagacctgacggtt 482
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 623 tactgaacatcaagccaaaacataacattcttcccaggctgtaatccagacctgacggtt 682
Query: 483 tatgtccttcca 494
||||||||||||
Sbjct: 683 tatgtccttcca 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
