Query= MSMg01no182_c22.b1 MSMg01no182_c22.b1 CHROMAT_FILE:
MSMg01no182_c22.b1 PHD_FILE: MSMg01no182_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:51 2005
(555 letters)
>mm_chr7_72982120_72983074
Length = 955
Score = 1004 bits (519), Expect = 0.0
Identities = 540/551 (98%), Gaps = 8/551 (1%)
Strand = Plus / Minus
Query: 9 ggaattcactctgtacaccaggctggcctggaactcagaaatccgcctgcctctgcctcc 68
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggaattcactctgtagaccaggctggcctggaactcagaaatccgcctgcctctgcctcc 574
Query: 69 cgagtgctgggattaaaggtgtgtgccaacacctctggttcatagagctcttgaggtaac 128
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 573 cgagtgctgggattaaaggtgtgtgccaacacctctggttcaaagagctcttgaggtaac 514
Query: 129 atttttagaatcctgcagggcaagaccaccatcaaagatgtcctcggcagcatcaggagc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atttttagaatcctgcagggcaagaccaccatcaaagatgtcctcggcagcatcaggagc 454
Query: 189 cccaactctatgctgccaactgtaaaggctcccggacttgctttcagagacctctactag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cccaactctatgctgccaactgtaaaggctcccggacttgctttcagagacctctactag 394
Query: 249 ggtgaagcaggctttcttgaccacggcacagaaaataacttcaggattcctcagtatgaa 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggtgaagcaggctttcttgaccacggcacagaaaataacttcaggattcctcagtatgaa 334
Query: 309 gcaagttgtagacatgctttggggggctggctaggtggctcggtgggtaaaggtgcttgc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gcaagttgtagacatgctttggggggctggctaggtggctcggtgggtaaaggtgcttgc 274
Query: 369 ggacacccccgcc----gatatcagagtttgattccccaagacccacctggtagaaaaat 424
||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggaca----agcctggtgatatcagagtttgattccccaagacccacctggtagaaaaat 218
Query: 425 aaaactgactccaacagtttgccctctgacttctgtgtgtgtgtgccatgctctcttgcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aaaactgactccaacagtttgccctctgacttctgtgtgtgtgtgccatgctctcttgcc 158
Query: 485 ccaaacaaacaaacaaaatacatataagtacaatagttttaagacagaaataggttaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ccaaacaaacaaacaaaatacatataagtacaatagttttaagacagaaataggttaata 98
Query: 545 tagacttaagc 555
|||||||||||
Sbjct: 97 tagacttaagc 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_c22.g1 MSMg01no182_c22.g1 CHROMAT_FILE:
MSMg01no182_c22.g1 PHD_FILE: MSMg01no182_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:51 2005
(232 letters)
>mm_chr7_72843545_72844175
Length = 631
Score = 387 bits (200), Expect = e-112
Identities = 224/232 (96%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 1 atttttgttagataatataaggtagattcagttttttatttctctccacgcggttagccc 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 atttttgttagataatataaggtagattcagttttttatttctctccatgtggttagccc 260
Query: 61 taagttaacaacataagctctacatccatcttataaatggcaaagagtttgctgttgtaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 261 taagttaacaacataagctctacatccatcttataaatggcaa-gagtttgctgttgcaa 319
Query: 121 atgtttttgtaaagagagataacttttaaattccaaggccattgttcataagtggtctct 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 atgtttttgtaaagagagataacttttaaattccaagcccattgttcataagtggtctct 379
Query: 181 gagaatattttattagcctgaatatcagtgtaaaatgttccctttttttgga 232
|||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 380 gagaatattttattagcctgcgtttcagtgtaaaatgttccctttttttgga 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 631
Length adjustment: 9
Effective length of query: 223
Effective length of database: 622
Effective search space: 138706
Effective search space used: 138706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
