Query= MSMg01no183_h11.b1 MSMg01no183_h11.b1 CHROMAT_FILE:
MSMg01no183_h11.b1 PHD_FILE: MSMg01no183_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:29 2005
(237 letters)
>mm_chr7_65733456_65734091
Length = 636
Score = 406 bits (210), Expect = e-118
Identities = 228/234 (97%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 1 ggacagaattgccccatccttgagacatgtggagatggagcagccaagttatttaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggacagaattgccccatccttgagacatgtggagatggagcagccaagttatttaggcca 260
Query: 61 tgcagatgaaagatttttctaccagtctccaggaatacatcctttaattaaggataagca 120
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tgaagatgaaagatttttctaccagtatccaggaatacatcctttaattaaggataagca 320
Query: 121 tgggacaagagcaggaaaccccttgggcaacagatgtgtctggaaagaaagtgagaatgg 180
|||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 321 tgggacaagaacaggaaaccccttgggca-cggatgtgtctggaaagaaagtgagaatgg 379
Query: 181 ccattaaacatacatcacagtgactcaccacagtactcactcatttcagtggtc 234
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 ccattaaacatacatcacagtgactcaccacggtactcactcatttcagtggtc 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 636
Length adjustment: 9
Effective length of query: 228
Effective length of database: 627
Effective search space: 142956
Effective search space used: 142956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no183_h11.g1 MSMg01no183_h11.g1 CHROMAT_FILE:
MSMg01no183_h11.g1 PHD_FILE: MSMg01no183_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:29 2005
(337 letters)
>mm_chr7_65896575_65897310
Length = 736
Score = 582 bits (301), Expect = e-170
Identities = 328/337 (97%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 1 aggaggcttgattccattttgtttcagttcaaggtcaggaataagaccagtggctgcctg 60
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 536 aggaggcttgattccattttgtttcagttcaaggtcaggaaaaagaacagtggctgcctg 477
Query: 61 tagaatggaggtggtactgatttgtgggagctggaaatgctctcactggacagattgtgt 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tagaatggaggtggttctgatttgtgggagctggaaatgctctcactggacagattgtgt 417
Query: 121 gctatagtatttctcattgttgcctgctaacctctgaaggagggcatgagtggatttaaa 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 416 gctatagtatttctcattgttgcctactaacctctgaaggagggcatgagtggatttaaa 357
Query: 181 gtgtttgtggatatagtaatgttctctttcgggatctgtaagcctttaacttggggatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtgtttgtggatatagtaatgttctctttcgggatctgtaagcctttaacttggggatca 297
Query: 241 cctgtaactgtctacttttatgtgattacttcctaaaagttcttatttgtatttcactct 300
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 296 cctgtaactgtctacttttatgtgattacttcctaaaagttcataagtgtatttcact-t 238
Query: 301 tacaaatgggttggatggagttggagagatggctcaa 337
|| ||||||||||||||||||||||||||||||||||
Sbjct: 237 tagaaatgggttggatggagttggagagatggctcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 736
Length adjustment: 9
Effective length of query: 328
Effective length of database: 727
Effective search space: 238456
Effective search space used: 238456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
