Query= MSMg01no183_i01.b1 MSMg01no183_i01.b1 CHROMAT_FILE:
MSMg01no183_i01.b1 PHD_FILE: MSMg01no183_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:32 2005
(347 letters)
>mm_chr7_99009322_99010068
Length = 747
Score = 594 bits (307), Expect = e-174
Identities = 337/347 (97%)
Strand = Plus / Plus
Query: 1 gtattaatcatttaaaaactatcctcacagcttactaaagaataaaatgtcattttcacc 60
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 201 gtattaatcatttaaaaactatcctcacagtttagtaaagaataaaatgtcattttcacc 260
Query: 61 agttagcaaattgcaaaagttgttagtgaggaaacaagaaagatcatacacatagatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttagcaaattgcaaaagttgttagtgaggaaacaagaaagatcatacacatagatgtt 320
Query: 121 tgggggcaaaaatgaagaaggtgcccagtgcgaacacaatgactctctagttgcataaag 180
||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||
Sbjct: 321 tggggaaaaaaatgaagaaggtgcccagtgggaacacaatgactctatagttgtataaag 380
Query: 181 tgatgaatatgacatgaaggaattagttagggtagaggaaaaacaatcatctaaaacaaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatgaatatgaaatgaaggaattagttagggtagaggaaaaacaatcatctaaaacaaa 440
Query: 241 ccacagagggttgctgcttactggcctgccacacatgacttgctcagtctgctttcttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacagagggttgctgcttactggcctgccacacatgacttgctcagtctgctttcttat 500
Query: 301 acaacccaggaccaccagcccagggatggtcccacctgcaatgggct 347
||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 501 acaacccaggaccaccagcccagggatggccccacccgcaatgggct 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_i01.g1 MSMg01no183_i01.g1 CHROMAT_FILE:
MSMg01no183_i01.g1 PHD_FILE: MSMg01no183_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:32 2005
(639 letters)
>mm_chr7_99155316_99156354
Length = 1039
Score = 1193 bits (617), Expect = 0.0
Identities = 630/639 (98%), Gaps = 8/639 (1%)
Strand = Plus / Minus
Query: 1 tctaaggatctagacagggacaaatgacaaaagttaagtaagatgttgtaagcaaggaga 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 678 tctaaggatctagacagggacaaacgacaaaagttaagtaagatgttgtaagcaaggaga 619
Query: 61 gcgttgtgggaaaatattaaagaaaatggtaggttacactgtgtgagtaactgagatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcgttgtgggaaaatattaaagaaaatggtaggttacactgtgtgagtaactgagatgat 559
Query: 121 gtatgaagtcaccaagggccattgtaaggaaagaaggaaaaagcacagcagtctactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtatgaagtcaccaagggccattgtaaggaaagaaggaaaaagcacagcagtctactgat 499
Query: 181 tataatgggatctggtcaggagcttgtatgtttccacttttctcccctgaatcctctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tataatgggatctggtcaggagcttgtatgtttccacttttctcccctgaatcctctttc 439
Query: 241 tcatgatcaggttaacctgcatctggcactaacattatttcactgacaggaaaattagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcatgatcaggttaacctgcatctggcactaacattatttcactgacaggaaaattagta 379
Query: 301 ccttcttgaatagccactgctctgagcttacaaatgacaggtaaagagaaaaacaggcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccttcttgaatagccactgctctgagcttacaaatgacaggtaaagagaaaaacaggcta 319
Query: 361 tggtctgacattcagcttctacaacagattcctggatgtctgaaactcaatgaatctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tggtctgacattcagcttctacaacagattcctggatgtctgaaactcaatgaatctaaa 259
Query: 421 ctatagcatcagaagaaaccatactagacccaaaataagtagaaagtaaagcaaaggaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctatagcatcagaagaaaccatactagacccaaaataagtagaaagtaaagcaaagga-- 201
Query: 481 acacacacacacacacacacacacacacacacacacacacacacacacatgtatacacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ------acacacacacacacacacacacacacacacacacacacacacatgtatacacat 147
Query: 541 gattacacaaatacataaatatacatacatgtgtgcatgcacatacatatgctaacacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gattacacaaatacataaatatacatacatgtgtgcatgcacatacatatgctaacacac 87
Query: 601 atgaacacataaacaaacacatgtatgtgcatttatgtg 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgaacacataaacaaacacatgtatgtgcatttatgtg 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
