Query= MSMg01no187_g22.b1 MSMg01no187_g22.b1 CHROMAT_FILE:
MSMg01no187_g22.b1 PHD_FILE: MSMg01no187_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:45 2005
(320 letters)
>mm_chr7_14998481_14999196
Length = 716
Score = 576 bits (298), Expect = e-169
Identities = 310/316 (98%), Gaps = 4/316 (1%)
Strand = Plus / Minus
Query: 5 gaattcattatgagaaaaggtagagacattctatatttctgaggtgtatatgaatacaca 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 516 gaattcattatgagaaaaggtagagacattctatatttctgaggtgtatatgaatataca 457
Query: 65 cggaatttcatgtgattgggaaaggaagatgacaccaagttggttttatgtgttacctta 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tggaatttcatgtgattgggaaaggaagatgacaccaagttggttttatgtgttacctta 397
Query: 125 tttaatttatttattcacttccttctttcttttttaataagcatggatatatgtatggtg 184
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttta----atttattcacttccttctttcttttttaataagcatggatatatgtatggtg 341
Query: 185 ggcatacatgatcacaagtgttgtgatgcatccttgtacaggtgtgtgtgggtgtataca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggcatacatgatcacaagtgttgtgatgcatccttgtacaggtgtgtgtgggtgtataca 281
Query: 245 tgtgtccatactcaagaggattcctaaaggaagtattgggtttctcctgctttctctctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgtgtccatactcaagaggattcctaaaggaagtattgggtttctcctgctttctctctg 221
Query: 305 ttattctctatttgat 320
||||||||||||||||
Sbjct: 220 ttattctctatttgat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 716
Length adjustment: 9
Effective length of query: 311
Effective length of database: 707
Effective search space: 219877
Effective search space used: 219877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_g22.g1 MSMg01no187_g22.g1 CHROMAT_FILE:
MSMg01no187_g22.g1 PHD_FILE: MSMg01no187_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:45 2005
(412 letters)
>mm_chr7_14932969_14933780
Length = 812
Score = 733 bits (379), Expect = 0.0
Identities = 403/411 (98%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 1 agttccatggaaagatgttttctaatcttttttattaaaaaaaaaatgttgcgagaagag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 201 agttccatggaaagatgttttctaatcttttttatttaaaaaaaaatgttgggagaagag 260
Query: 61 ctggcatctagctgagtgatataactctttgctttcttgctattcacaaggccccagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggcatctagctgagtgatataactctttgctttcttgctattcacaaggccccagctt 320
Query: 121 aaatctctattatcaagaaaaactgggaggggtagagagaagagtcaatgttaagggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatctctattatcaagaaaaactgggaggggtagagagaagagtcaatgttaagggtat 380
Query: 181 ttgttgcacttgcagaagaacctagttcaactccagcatccacatagcagttcataactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgttgcacttgcagaagaacctagttcaactccagcatccacatagcagttcataactg 440
Query: 241 tctgtaactccagtttcagaggatctgatatctcctctggcctccacgtgcctgctgcgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 tctgtaactccagtttcagaggatctgatatctcctctggcctccacgtgcctgctgcac 500
Query: 301 aattatctataaaaacacccacacacaaagaataaaaataaacaacgccccaaaaaaaac 360
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 501 aattatctataaaaacacccacacacaaagaataaaaataaacaatgcttcaaaaaaaac 560
Query: 361 atatgggnggtggtggtgactggaagaagaattatatttagtgagggagtc 411
| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatggg-ggtggtggtgactggaagaagaattatatttagtgagggagtc 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
