TTCCACCNNNNNNTTAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCGCGGAATTCTATAGGTAGTTCCCACTTCCCAGGCGT
CTGTGATGAAGAACTGCTACTGTTGAGCTTTGCCATCCCCTAGCTTTCCT
AACTCAAACTTCGTGTTTCTGCTGAATGCCTCCAAGTTTCTAAACCTGGT
AGGGAAAATGGCCCATGTTGTAGACCTACCATTCCTGGGCCTGAGGCAGA
AGGATCAACTGAGCCTAGAAGTACAAAACCAGCCTTGGCAAAGAGAAAGG
ACCAAAACCTGTTTTATGATTTGAGGTGTATTTAACATCATGCTAAAAGC
TTAAAACCACATCTTCCCCGATATCCTCAAGTCATTTTTCCTTTCTAATC
ACACTTTCAAGGACGCTTTGGATGGGCTACTTAACTGGAAGATAGCTTCT
TCATTGCCCTGTCTTTCCTCAAAATAGGTAAAGCATTTATAACAGTATTT
GCCCTTATTCCAACCAAATTCAACTACAATTGCTCATTAAGTTCAAGAAA
CAGTACTTGGACATTTTACCTTTCAGGCTACTACTTAACTTCTACCTTAT
TTATTACACCTCCTTGTGCCTGGTATTGGTAAACTAGTATTAAATACCAA
AAACCAAATGAGTTTAGAATAAATCCAACTAGGTTGAGGGTAGTGACACA
TGCCTTTCATCCCAGCACTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGGTTGTAAAAGGTTAGGGAAAAAG
GGAGATGGGAAGTTAGTGTTCCACTGGCACAGAGTTTCAATTCAGGAAGA
AAGTAAAAAAGTTCTGAAAATGATGGTTGTACAATGTGAAATGTTTAATG
TCACTGAACTGCGTGTAAAAATAGCTAAGGAGTTCAATTTTATGTATTAT
ATTGCAAAGATGAATTCCTGAAACTCTATGGTAGCCTGCCTAAGACCTGC
GCAAGATCAGGCCAATCAACATGACCAAGCACGAAGTTCATGACCTCATC
TCAACTGAAGAGCTGTGTACTTCTGACGCCTTCTACAGGAGGGAGAGTCA
ATGTCCTTTAAAAGGATTATCCAGGGGGCTGGTGAGATGACTCAGCAGTT
AAGAGCACTGACTGCTCTTCCGGAGGTCCTGAGATCAAATCCCAGCAACC
ACATGGTGGCTCACAACCATCCATAATGAGATCTGAAGACAGCTACAGTG
TACTTACATATAATAAGTAAAATAAAATAAAATTAAGTTTAAAAAAGAGG
ATTATCCAATGTTTTTGTGGATTGGCCACACTCCAGTCAACAGCCCCACC
CCAGGAGTGTATGGTTGGCACCAGTTAAAGCCCTTGAACATAAAGTGGGG
ACTCCCTTGGCTGGTGGACTGGGACACATGCCTGAGGTATCTAAGTTACA
ATG

Query= MSMg01no188_f01.b1 MSMg01no188_f01.b1 CHROMAT_FILE:
MSMg01no188_f01.b1 PHD_FILE: MSMg01no188_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:56 2005
         (658 letters)



>mm_chr7_88909142_88910198
          Length = 1057

 Score = 1156 bits (598), Expect = 0.0
 Identities = 622/630 (98%), Gaps = 1/630 (0%)
 Strand = Plus / Minus

                                                                        
Query: 29   cccaggcgtctgtgatgaagaactgctactgttgagctttgccatcccctagctttccta 88
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 cccaggcgtctgtgatcaagaactgctactgttgagctttgccatcccctagctttccta 998

                                                                        
Query: 89   actcaaacttcgtgtttctgctgaatgcctccaagtttctaaacctggtagggaaaatgg 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997  actcaaacttcgtgtttctgctgaatgcctccaagtttctaaacctggtagggaaaatgg 938

                                                                        
Query: 149  cccatgttgtagacctaccattcctgggcctgaggcagaaggatcaactgagcctagaag 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937  cccatgttgtagacctaccattcctgggcctgaggcagaaggatcaactgagcctagaag 878

                                                                        
Query: 209  tacaaaaccagccttggcaaagagaaaggaccaaaacctgttttatgatttgaggtgtat 268
            |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 877  tacaaaaccagctttggcaaagagaaaggaccaaaacctattttatgatttgaggtgtat 818

                                                                        
Query: 269  ttaacatcatgctaaaagcttaaaaccacatcttccccgatatcctcaagtcatttttcc 328
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817  ttaacatcatgctaaaaacttaaaaccacatcttccccgatatcctcaagtcatttttcc 758

                                                                        
Query: 329  tttctaatcacactttcaaggacgctttggatgggctacttaactggaagatagcttctt 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757  tttctaatcacactttcaaggacgctttggatgggctacttaactggaagatagcttctt 698

                                                                        
Query: 389  cattgccctgtctttcctcaaaataggtaaagcatttataacagtatttgcccttattcc 448
            ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 697  cattgtcctgtctttcctcaaaataggtaaagcatttataacagta-ctgcccttattcc 639

                                                                        
Query: 449  aaccaaattcaactacaattgctcattaagttcaagaaacagtacttggacattttacct 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638  aaccaaattcaactacaattgctcattaagttcaagaaacagtacttggacattttacct 579

                                                                        
Query: 509  ttcaggctactacttaacttctaccttatttattacacctccttgtgcctggtattggta 568
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 578  ttcaggctactacttaacttctaccttatttattacacctccttgtgcctggtattggca 519

                                                                        
Query: 569  aactagtattaaataccaaaaaccaaatgagtttagaataaatccaactaggttgagggt 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518  aactagtattaaataccaaaaaccaaatgagtttagaataaatccaactaggttgagggt 459

                                          
Query: 629  agtgacacatgcctttcatcccagcacttg 658
            ||||||||||||||||||||||||||||||
Sbjct: 458  agtgacacatgcctttcatcccagcacttg 429


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space:   678456
Effective search space used:   678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)