Query= MSMg01no195_f21.b1 MSMg01no195_f21.b1 CHROMAT_FILE:
MSMg01no195_f21.b1 PHD_FILE: MSMg01no195_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:34 2005
(655 letters)
>mm_chr7_79736365_79737419
Length = 1055
Score = 1098 bits (568), Expect = 0.0
Identities = 629/652 (96%), Gaps = 9/652 (1%)
Strand = Plus / Plus
Query: 5 gaattcagaagtgtgacagaaattgttcaaaagaagccataggagttcgttttgtttgaa 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattcagaagtgtgagagaaattgttcaaaagaagccataggagttcgtttggtttgaa 264
Query: 65 gaggaattttcatgttaactgagtagccctggtcccagtctgtctgagtgccttgagatt 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 gaggaattctcatgttaactgagtagccctggtcccagtctgtctgagtgcctagagatt 324
Query: 125 caaatgtgagtctgcctcatactctctctcctaaatgaaacatccttatttctagatcta 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagatgtgagtctgcctcatactctctctcctaaatgaaacatccttatttctagatcta 384
Query: 185 aggtaattttattaatttttatagatatgaaaaacaaaagtttatcttaaaacaaaatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtaattttattaatttttatagatatgaaaaacaaaagtttatcttaaaacaaaatat 444
Query: 245 ataaaattatgactaataaaaataaaatcgtcacaaggagacagcaatggctaacaacct 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaaaattatgactaataaaaataaaatcgtcacaaggagacagcaatggctaacaacct 504
Query: 305 gacatattttattcctgaaaatgatatccattttttactgtaaatctctctaataatgtg 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gacatattttattcctgaaaacgatatccattttttactgtaaatctctctaataatgtg 564
Query: 365 tccgtaaacatttttgtatacagtttagtatattaactttctctaaaattatgaaagtaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccgtaaacatttttgtatacagtttagtatattaactttctctaaaattatgaaagtaa 624
Query: 425 tatgctttaatgtaatcagagagacaatgtgaaaataaataatgaatgatctcctgtttg 484
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 625 tatgctttaatgtaatcagagagacaatgtgaaaataaataatgaatgatct---gt--g 679
Query: 485 tggccatttcctgcttcttgttctcagagaaccttgttctcatctctcctgctcagaaac 544
||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 680 tggtcatttcctgcttcttgttctcaaagaaccttgttctcatctgtcctgctcagaaac 739
Query: 545 taagtaggctgaggatagagagtgggcagagatggaggacagcaccatctgtcacttctc 604
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 740 taagtaggctgaggatagagagtcggcggagatggaggacagcaccatctgtcacttctc 799
Query: 605 acagtccat-caaactgtgcgaggcccatggaaataaggaacatcagttgtt 655
||||||| | | ||||| |||| ||||||||||||||||||||||||||||
Sbjct: 800 acagtcc-tgccaactg--cgagtcccatggaaataaggaacatcagttgtt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_f21.g1 MSMg01no195_f21.g1 CHROMAT_FILE:
MSMg01no195_f21.g1 PHD_FILE: MSMg01no195_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:34 2005
(656 letters)
>mm_chr7_79897469_79898524
Length = 1056
Score = 1069 bits (553), Expect = 0.0
Identities = 578/591 (97%), Gaps = 9/591 (1%)
Strand = Plus / Minus
Query: 66 gtgccagctgctcggttaagttctgtctgcttctgacataaaggcttctgtagcttagta 125
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gtgccagctgctgggttaagttctgtctgcttctgacataaaggcttctgtagcttagta 997
Query: 126 ttaggtgggcctctgagttggggttcacaccctcagggttgggatagatagagagcaggg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 ttaggtgggcctctgagttggggttcacaccctcagggttgggatagatagagagcaggg 937
Query: 186 atgtttacgaggtcttttcttggatttttttcttttcctttttggcaaaataactgagat 245
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 936 atgtttacgaggtcttttcttgga-atttttcttttcctttttggcaaaataactgagat 878
Query: 246 gtacttattgcacgagtttcagagggtccgagttacattgagtcacccactccctttaat 305
||||||||||||||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 877 gtacttattgcacgagtttca--------gagttacattaagtcacccactctctttaat 826
Query: 306 ccccaccaccttctactcagagcttggaaacaggttttctgagtacttccagcatttcat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ccccaccaccttctactcagagcttggaaacaggttttctgagtacttccagcatttcat 766
Query: 366 ctttacatactctggtttcttacaaggtcgtgaggagggtaaggctgagaacattccaaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ctttacatactctggtttcttacaaggtcgtgaggagggtaaggctgagaacattccaaa 706
Query: 426 gggattatgcacattctgcaagaacctgaaaaagcaattgataaaggcttagctgcttac 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gggattatgcacattctgcaagaacctgaaaaagcaattgataaaggcttagctgcttac 646
Query: 486 ccagggatacaggtgtgggggggccatcacacagagggagcctcacaaggttcccaggcc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ccagggatacaggtgtgggggggccatcacacagagggagcctcacaaggttcccaggcc 586
Query: 546 tttgtcatcttatagccccctcctccagaggctgaatccttaccagagattaaaatgtaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttgtcatcttatagccccctcctccagaggctgaatccttaccagagattaaaatgtaa 526
Query: 606 tgacacaatgaattgagaccagaaatcatcattggaaactgttctttgagg 656
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgacacaatgaattgagaccagaaatcatcattggaaactgttctttgagg 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
