Query= MSMg01no195_i14.b1 MSMg01no195_i14.b1 CHROMAT_FILE:
MSMg01no195_i14.b1 PHD_FILE: MSMg01no195_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:47 2005
(581 letters)
>mm_chr7_30182295_30183275
Length = 981
Score = 1085 bits (561), Expect = 0.0
Identities = 573/577 (99%)
Strand = Plus / Minus
Query: 5 gaattctcagtgccttgtctaggaaaaaaggggagagcagaaaccttatttaaagggaga 64
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 781 gaattctcagtggcttgtctaggaaaaaaggggagagcagaaatcttatttaaagggaga 722
Query: 65 gcagtggcttatttatgactgttaccctaagcatctccattatttgggtctgtagaagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcagtggcttatttatgactgttaccctaagcatctccattatttgggtctgtagaagtg 662
Query: 125 tggtcagatacaggcatgacttagggatctgtgtcagggctctgaacacttcagaggtcc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 tggtcagatacaggcatgacttagggatctgtgtcagggctctgaacacttctgaggtcc 602
Query: 185 atagctcctaatggccagcttttaagccacatgctcgctgtgtgccagcctggtgctgtg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttagctcctaatggccagcttttaagccacatgctcgctgtgtgccagcctggtgctgtg 542
Query: 245 ctaaataactcagttaatccacacattgctgagttaagcacatttgactgctaagaatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctaaataactcagttaatccacacattgctgagttaagcacatttgactgctaagaatct 482
Query: 305 catcatgtgacctagctggggccatatatctaatctcaacccagaatttgtgttggcagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catcatgtgacctagctggggccatatatctaatctcaacccagaatttgtgttggcagg 422
Query: 365 agactccctaggctcagagcttaactgctccacaacagctaatgggagctaaaccaggca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agactccctaggctcagagcttaactgctccacaacagctaatgggagctaaaccaggca 362
Query: 425 agccgttaacagagccaggattaatctcagtggccctgggccagtgacccactgtgtact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agccgttaacagagccaggattaatctcagtggccctgggccagtgacccactgtgtact 302
Query: 485 atgccaagcttttcatcactgtggtctcgctctcacacaacagttctgaattgtgggcag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgccaagcttttcatcactgtggtctcgctctcacacaacagttctgaattgtgggcag 242
Query: 545 cctctgagtccctgtccctcagatgggaatactgagg 581
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctctgagtccctgtccctcagatgggaatactgagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_i14.g1 MSMg01no195_i14.g1 CHROMAT_FILE:
MSMg01no195_i14.g1 PHD_FILE: MSMg01no195_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:48 2005
(277 letters)
>mm_chr7_30097534_30098212
Length = 679
Score = 520 bits (269), Expect = e-152
Identities = 276/279 (98%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 1 ggcagggctacataatgagaccctgtctcaagcaacaacagcaacaacgacgacaaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcagggctacataatgagaccctgtctcaagcaacaacagcaacaacgacgacaaactc 260
Query: 61 aaaaaccccaagaatgatgagcctttctttccctggctttccagctccttactcctaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaccccaagaatgatgagcctttctttccctggctttccagctccttactcctaacc 320
Query: 121 ctcctccctacaggcatatggcattggaggtctccgcaaacgccaggacaccgcatccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctccctacaggcatatggcattggaggtctccgcaaacgccaggacaccgcatccct 380
Query: 181 ggaggaccgagacaagccgtacgtctgtgatagtgagttctgcagaggggaaagagagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggaccgagacaagccgtacgtctgtgatagtgagttctgcagaggggaaagagagat 440
Query: 241 gggggtttggggggg--cagtgacctctcccttatggcc 277
||||||| ||||||| ||||||||||||||||||||||
Sbjct: 441 gggggttggggggggggcagtgacctctcccttatggcc 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 679
Length adjustment: 9
Effective length of query: 268
Effective length of database: 670
Effective search space: 179560
Effective search space used: 179560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
