Query= MSMg01no195_m15.b1 MSMg01no195_m15.b1 CHROMAT_FILE:
MSMg01no195_m15.b1 PHD_FILE: MSMg01no195_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:06 2005
(312 letters)
>mm_chr7_30304045_30304756
Length = 712
Score = 557 bits (288), Expect = e-163
Identities = 305/316 (96%), Gaps = 9/316 (2%)
Strand = Plus / Minus
Query: 5 gaattccttatggagtgtttttgttgtttttttataggtcgaatcttcactcatgtctac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaattccttatggagtgtttttgttgtttttttataggtcgaatcttcactcatgtctac 567
Query: 65 gagtggactaaatctggacattccccaggctataggcactcaacaa---------accct 115
|||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 566 gagtggactaaatctggacattccccaggctataggcactcaacaaacagcagttaccct 507
Query: 116 cagactatggcattattgaatgaatagaagagaaaaagccttccaggcagcccctatggg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cagactatggcattattgaatgaatagaagagaaaaagccttccaggcagcccctatggg 447
Query: 176 tcgtgattctgcgcctcccatctcggggactggtctggagcagagaggaacacggggagc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcgtgattctgcgcctcccatctcggggactggtctggagcagagaggaacacggggagc 387
Query: 236 cgcgtcctcacgttccggctccccgaatccacatgggcgggatttaggtgtgtccacctc 295
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 386 cgcgtcctcacgttccggctccccgaatccacatgggcgggaggtaggtgtgtccacctc 327
Query: 296 cttcgggcaggagccg 311
||||||||||||||||
Sbjct: 326 cttcgggcaggagccg 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_m15.g1 MSMg01no195_m15.g1 CHROMAT_FILE:
MSMg01no195_m15.g1 PHD_FILE: MSMg01no195_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:06 2005
(245 letters)
>mm_chr7_30171901_30172545
Length = 645
Score = 416 bits (215), Expect = e-121
Identities = 233/239 (97%)
Strand = Plus / Plus
Query: 7 cagactaggatgacctcagactcagagatctgcctgctgctgcctcccaggtactcccca 66
|||||||||||||||||||||| |||||||||||||| |||||| ||||||| |||||||
Sbjct: 207 cagactaggatgacctcagactgagagatctgcctgccgctgccccccaggtgctcccca 266
Query: 67 cttactcttgacatccagctgcgcggcatacttggtgaagcccttcagacagaccttgtc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cttactcttgacatccagctgcgcggcatacttggtgaagcccttcagacagaccttgtc 326
Query: 127 gcccaagaggtccaggaactcctcaaaggcagggccggcttcctcgttgttgtacatctc 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 327 gcccaagaggtccaggaactcctcgaaggcagggccggcttcctcgttgttgtacatctc 386
Query: 187 ctcctctgagctctggcccgccttgcagtacaggatgccgaccttgtgctttcggcaca 245
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 387 ctcctctgagctctggcccgccttgcagtacaggatgccgaccttgtgcttgcggcaca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
