Query= MSMg01no195_m24.b1 MSMg01no195_m24.b1 CHROMAT_FILE:
MSMg01no195_m24.b1 PHD_FILE: MSMg01no195_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:08 2005
(709 letters)
>mm_chr7_87343925_87345034
Length = 1110
Score = 1350 bits (698), Expect = 0.0
Identities = 704/706 (99%), Gaps = 1/706 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccccctactccaaa-acagggacttggaaactgacattgcgaagacccatctg 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccccctactccaaacacagggacttggaaactgacattgcgaagacccatctg 264
Query: 64 taccctgtctagaggggcctgagggtatcaccctggtgggccacattccttttttggtgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taccctgtctagaggggcctgagggtatcaccctggtgggccacattccttttttggtgg 324
Query: 124 tttacagctgcccctggctgcctgtgtttccaatcctccactcattctttacttccctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttacagctgcccctggctgcctgtgtttccaatcctccactcattctttacttccctta 384
Query: 184 gtctgatcgcccctgaaccttttccagggaacctcaacgtttggaattctagggacttag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctgatcgcccctgaaccttttccagggaacctcaacgtttggaattctagggacttag 444
Query: 244 cccagtaagtacttcctactgcccgcactccagcttcctcccctgcaaagtcgcctcagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccagtaagtacttcctactgcccgcactccagcttcctcccctgcaaagtcgcctcagg 504
Query: 304 cttagataccttgcaaagtcatcttgggaaattcataaaacttggtgcattcggagggca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttagataccttgcaaagtcatcttgggaaattcataaaacttggtgcattcggagggca 564
Query: 364 tcaggcacataggtgccaacagacaatgtttggccaaacccctctaaattgcaaactgtc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcaggcacataggtgccaacagacaatgtttggccaaacccctctaaattgcaaactgtc 624
Query: 424 actgtgagttagtgcataaattagaggttacagactaaaactctaccagacttcctactc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 actgtgagttagtgcataaattagaggttacagactaaaactctaccagacttcctactc 684
Query: 484 catatttgcatccccacccttaaaagcatcccatttgcaaaaggatagaatcagctcttc 543
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catatttgcatccccacccctaaaagcatcccatttgcaaaaggatagaatcagctcttc 744
Query: 544 agttaaggcccctaacaggatctcagtcccttatccaaaacattgttggtagctcaagtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agttaaggcccctaacaggatctcagtcccttatccaaaacattgttggtagctcaagtt 804
Query: 604 caaatcctgtctcagccacttagttcccacatgaccttaagtaaacaacttctctgtgcc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 caaatcctgtctcagccacttagttcccacatgaccttaagtaaacaacttctctgtgcc 864
Query: 664 ttgatttcttcatctgtaaaatgggatattagcgccttgctcaagg 709
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ttgatttcttcatctgtaaaatgggatattagcgccttgctcaagg 910
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1110
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1100
Effective search space: 768900
Effective search space used: 768900
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no195_m24.g1 MSMg01no195_m24.g1 CHROMAT_FILE:
MSMg01no195_m24.g1 PHD_FILE: MSMg01no195_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:08 2005
(225 letters)
>mm_chr7_87367195_87367819
Length = 625
Score = 416 bits (215), Expect = e-121
Identities = 221/223 (99%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 1 ctggctagccagggctatagtgagaccctgtctcaaaaaaggagaaaataaaactcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctggctagccagggctatagtgagaccctgtctcaaaaaaggagaaaataaaactcaacc 374
Query: 61 aagcataaagaatacaagcactacagaagttgcccagaatctgctatgaatcagccaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aagcataaagaatacaagcactacagaagttgcccagaatctgctatgaatcagccaagg 314
Query: 121 gagaccttacatccatgcttccaggagtttatcaggggttctgctgctgttgttttgttt 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 313 gagaccttacatccatgcttccaggagtttatcagggtttctgctgctgttgttttgttt 254
Query: 181 tactggg-gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 222
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 253 tactgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
