Query= MSMg01no196_g24.b1 MSMg01no196_g24.b1 CHROMAT_FILE:
MSMg01no196_g24.b1 PHD_FILE: MSMg01no196_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:59 2005
(547 letters)
>mm_chr7_79691340_79692286
Length = 947
Score = 930 bits (481), Expect = 0.0
Identities = 527/547 (96%), Gaps = 8/547 (1%)
Strand = Plus / Minus
Query: 1 aatgagactctctttcaaaaacaaacaaacaaacaaacaaacaaacaaacaactttaaaa 60
|||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 792 aatgagactctctttcaa--------gaacaaacaaacaaacaaacaaacaattttaaaa 741
Query: 61 tataaagtaaaatgatttagccttttgtgaaaatatgcaatttacttgcctgttgaatag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 740 tataaagtaaaatgatttagccttttgtgaaaatatgcaatttacttgcctgttaaatag 681
Query: 121 gtattaggctgtggaaaggagggacaagcatctctgataaactctacatgtccttgtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtattaggctgtggaaaggagggacaagcatctctgataaactctacatgtccttgtctc 621
Query: 181 ctttgaagctctgctggattctgccctcctccaagggacacatgtgacacagcaaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttgaagctctgctggattctgccctcctccaagggacacatgtgacacagcaaattca 561
Query: 241 ctgaatgactcgggagagtcatagagaggggcaagtgtgggctgcttcaccttacaaccc 300
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 ctgaatgactcgagagagtcatagagaggggcaagtgtgtgctgcttcaccttacaaccc 501
Query: 301 cagctcggttggtatttccattgacgtttccagagtctctgcccaacatgttgtaagtct 360
|||||||||||||||||||||||| |||||||||||||||| || |||||||||||||
Sbjct: 500 cagctcggttggtatttccattgatgtttccagagtctctggggaaaatgttgtaagtct 441
Query: 361 gagttatccttccttcattactatttgttcaatactattgagtgtatttcaggaggactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagttatccttccttcattactatttgttcaatactattgagtgtatttcaggaggactt 381
Query: 421 tacattttaacagaggcaccaaattaacctttaagaatcatactctctaaatatttcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacattttaacagaggcaccaaattaacctttaagaatcatactctctaaatatttcatt 321
Query: 481 ttcacctttaacaaaaattatattttgtgctaacatttttcaacccaagatacatcttga 540
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 320 ttcacctttaacaaaaattatattttgtgctaacgttttttaacccaagatacatcttga 261
Query: 541 cattcaa 547
|||||||
Sbjct: 260 cattcaa 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no196_g24.g1 MSMg01no196_g24.g1 CHROMAT_FILE:
MSMg01no196_g24.g1 PHD_FILE: MSMg01no196_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:59 2005
(487 letters)
>mm_chr7_79590347_79591234
Length = 888
Score = 787 bits (407), Expect = 0.0
Identities = 440/451 (97%), Gaps = 4/451 (0%)
Strand = Plus / Plus
Query: 1 catcataaaagaaggttagtagaggccatttttgttgaacccaagagcagacaagctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 catcataaaagaaggttagtagaggccatttttgttgaacccaagagcagagaagctgct 260
Query: 61 gggcctgacatctgtagctgggattcattgggagaagcccaaccctaacagcattgtgct 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggcctgacaactgtagctgggattcattgggagaagcccaaccctaacagcattgtgct 320
Query: 121 tcttcctacatgtctagccaagtcttgctagctataaacagggtatctgtataaaggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttcctacatgtctagccaagtcttgctagctataaacagggtatctgtataaaggtag 380
Query: 181 agagagtaagaaacgggtactcaggagggtctagagtttacatcttcaagtatgcatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagagtaagaaacgggtactcaggagggtctagagtttacatcttcaagtatgcatata 440
Query: 241 aaaagatctttttctagctggatctaaaacattaccaatggagatgggggtgtcaatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaagatctttttctagctggatctaaaacattaccaatggagatgggggtgtcaatctg 500
Query: 301 caataacattgatcaaaaattatgcaagaggtgtggcaacctgcacag-agttatgactt 359
|||||||||||||||||||||| ||||||||| |||||||||| | || |||||||||||
Sbjct: 501 caataacattgatcaaaaattacgcaagaggtatggcaacctgga-aggagttatgactt 559
Query: 360 aaccagcttatgcattttcagactgaagatctagaattctttttgtactttccatttatg 419
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 aaccagcttatgcattttcagactgaagatctagagttctttttgtactttccatttatg 619
Query: 420 ggaaaaaaaa-gaaaa-gaaagaaagaaaga 448
| |||||||| ||||| ||||||||||||||
Sbjct: 620 gcaaaaaaaaagaaaaagaaagaaagaaaga 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 888
Length adjustment: 10
Effective length of query: 477
Effective length of database: 878
Effective search space: 418806
Effective search space used: 418806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
