Query= MSMg01no197_e06.b1 MSMg01no197_e06.b1 CHROMAT_FILE:
MSMg01no197_e06.b1 PHD_FILE: MSMg01no197_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:05 2005
(326 letters)
>mm_chr7_135776500_135777224
Length = 725
Score = 584 bits (302), Expect = e-171
Identities = 317/322 (98%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 5 gaattccaagccagtcacgcctacacaattttgagatcctgtctcaaaaatttaaaaaac 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gaattccaagccagccaggcctacacaattttgagatcctgtctcaaaaatttaaaaaac 630
Query: 65 aaataaatagagttagcaatagcagtgcatgctataatctccgatgttgtccaggctaag 124
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 629 aaataaatagagttaggaatagcagtgcatgctataatctctgatgttgtccaggctaag 570
Query: 125 gcaagaggatcttgagtttcaggccaccctactctaatggcaagactgtttctcaaaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gcaagaggatcttgagtttcaggccaccctactctaatggcaagactgtttctcaaaata 510
Query: 185 aacaaaaccaaagaggcctgcctatctgactggggttgtacaccccagcaacctgctgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aacaaaaccaaagaggcctgcctatctgactggggttgtacaccccagcaacctgctgca 450
Query: 245 acacctcaccttctcccccccccccccaaacagcgcagtgagccactgaaacaggaagtt 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acacctcaccttc-cccccccccccccaaacagcgcagtgagccactgaaacaggaagtt 391
Query: 305 ttaaatgccgcatgtgattaca 326
||||||||||||||||||||||
Sbjct: 390 ttaaatgccgcatgtgattaca 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 725
Length adjustment: 9
Effective length of query: 317
Effective length of database: 716
Effective search space: 226972
Effective search space used: 226972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_e06.g1 MSMg01no197_e06.g1 CHROMAT_FILE:
MSMg01no197_e06.g1 PHD_FILE: MSMg01no197_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:05 2005
(280 letters)
>mm_chr7_135632442_135633121
Length = 680
Score = 427 bits (221), Expect = e-124
Identities = 244/259 (94%), Gaps = 12/259 (4%)
Strand = Plus / Plus
Query: 1 agttgcaaattagcaatgatcaaacccagggtctggccacccggactgggggaagcggct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 201 agttgcaaattagcaatgatcaaacccagggtctggccacccggagtgggggaagtggct 260
Query: 61 ttgagaatcaacagaaaaactgttacttctcaggaaacagtggtaagagccagaataact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagaatcaacagaaaaactgttacttctcaggaaacagtggtaagagccagaataact 320
Query: 121 ggtcacattaaaggaaagagaagagtcattataaaagtcattctcctttgattgattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcacattaaaggaaagagaagagtcattataaaagtcattctcctttgattgattttt 380
Query: 181 ctaagtcagtttccacagtctctatgttctctgttccacaaggtctaaaagcttgaagca 240
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 c------------cacagtctctatgttctctgttccacaaggtctaaaagcttgaagca 428
Query: 241 agggagcttatcttgtcta 259
|||||||||| ||||||||
Sbjct: 429 agggagcttagcttgtcta 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
