Query= MSMg01no197_j03.b1 MSMg01no197_j03.b1 CHROMAT_FILE:
MSMg01no197_j03.b1 PHD_FILE: MSMg01no197_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:30 2005
(124 letters)
>mm_chr7_129612412_129612935
Length = 524
Score = 232 bits (120), Expect = 5e-66
Identities = 123/124 (99%)
Strand = Plus / Plus
Query: 1 tgggactaaaggggaggaagcacatgagctgggctgcagatactggggtcacaggggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggactaaaggggaggaagcacatgagctgggctgcagatactggggtcacaggggatc 260
Query: 61 aggagtggaggccttgctggaggtggggagagcatcgtctcttcttctctttgtttctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 aggagtggaggccttgctggaggtggggagagcatcgtctcttcttctctttgttcctct 320
Query: 121 ggtt 124
||||
Sbjct: 321 ggtt 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no197_j03.g1 MSMg01no197_j03.g1 CHROMAT_FILE:
MSMg01no197_j03.g1 PHD_FILE: MSMg01no197_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:30 2005
(656 letters)
>mm_chr7_129723381_129724434
Length = 1054
Score = 1203 bits (622), Expect = 0.0
Identities = 647/656 (98%), Gaps = 2/656 (0%)
Strand = Plus / Minus
Query: 1 ccatactaagaggagacagaagaactggtgctagcctatccagagggagcatgtgccttg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 854 ccatactaagaggagacagaagaactggtgccagcctatccagagggagcatgtgccttg 795
Query: 61 caggaagagattacgcacagccagactaccctgcaggacagagcagagctaagatcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 caggaagagattacgcacagccagactaccctgcaggacagagcagagctaagatcatgt 735
Query: 121 gaagggcaggaccatggcttgaccagggcagcttcgttatccatatgtctctccctctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gaagggcaggaccatggcttgaccagggcagcttcgttatccatatgtctctccctctat 675
Query: 181 ctaaagccaagccacaccataacccccaaggcagactcatagtttgcttttttccaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctaaagccaagccacaccataacccccaaggcagactcatagtttgcttttttccaaagt 615
Query: 241 agccatattgaataatctaatctcccttctcggactgctttatgtagccttgaggatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agccatattgaataatctaatctcccttctcggactgctttatgtagccttgaggatcat 555
Query: 301 gtttttatacataacaacaagaacctaaaacaaggacatatgcagaagtgaagcaactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtttttatacataacaacaagaacctaaaacaaggacatatgcagaagtgaagcaactgg 495
Query: 361 ggcctggaaaaaaattgtatctcaacctaggggactttgtacatgtttctcaaggcatgc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggcctggaaaaaaactgtatctcaacctaggggactttgtacatgtttctcaaggcatgc 435
Query: 421 tgtgagctctttcaggtcaggggctgggtaagcctgttcctggcacttgggcaacacaag 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 434 tgtgagctctttcaggtcaggggctgggtaagcctgttcctggcacttgagcaacacaag 375
Query: 481 aggtgcccagagagtgagagaacacatgcttagacgcaaaagagactttttttttaggag 540
|||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||
Sbjct: 374 aggtgcccagagagtgagagaacacatgcttagatgcaaaagagacctttttt--aggag 317
Query: 541 tgcagctctggctcttaatagctgggcatgtttgacgtgttgatatctgggtttcctcat 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 316 tgcagctctggctcttaatagctgggcatatttgacgtgttgatatctgggtttcctcat 257
Query: 601 ttgaacagtggagggaatcagatccagggtgctgtccgtaaggctaatgaggcaga 656
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 256 ttgaacagtggagggaatcagatccagggtgctgtccataaggctaatgaggcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1054
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1044
Effective search space: 674424
Effective search space used: 674424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
