Query= MSMg01no198_m21.b1 MSMg01no198_m21.b1 CHROMAT_FILE:
MSMg01no198_m21.b1 PHD_FILE: MSMg01no198_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:09 2005
(301 letters)
>mm_chr7_18502906_18503606
Length = 701
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%)
Strand = Plus / Minus
Query: 1 acatgtgcagtgtgattcagaaggtgttggcccagatgacctacaaaacttcagctttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acatgtgcagtgtgattcagaaggtgttggcccagatgacctacaaaacttcagctttca 441
Query: 61 tggcagtctataactggtttgatagtctatggaatttttgaattcactataagcatgctc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 440 tggcagtctataactggtttgatagtctatggaatttgtgaattcactataagcatgttc 381
Query: 121 tctgcaagttctaacagaaaatcaaaacaaagcattgacaaaaaggttcccagtggcacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctgcaagttctaacagaaaatcaaaacaaagcattgacaaaaaggttcccagtggcacg 321
Query: 181 tggagatgaagcatgaagagtttggagccagagcatcctggtgggctttgtgtggagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggagatgaagcatgaagagtttggagccagagcatcctggtgggctttgtgtggagtca 261
Query: 241 gtgtgtcctcaaccatggcttgcccaagctccacagagtctctcttggagccaggtgtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtgtgtcctcaaccatggcttgcccaagctccacagagtctctcttggagccaggtgtac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_m21.g1 MSMg01no198_m21.g1 CHROMAT_FILE:
MSMg01no198_m21.g1 PHD_FILE: MSMg01no198_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:09 2005
(292 letters)
>mm_chr7_18329636_18330326
Length = 691
Score = 557 bits (288), Expect = e-163
Identities = 291/292 (99%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 acagaactagacagaggctcagcctcaggaagcacacaatgaaaaagagatggtaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagaactagacagaggctcagcctcaggaagcacacaatgaaaaagagatggtaaggat 260
Query: 61 agatgtgagagttttcttacataaacttaaccactattaaagtcttttggaagctggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatgtgagagttttcttacataaacttaaccactattaaagtcttttggaagctggtgt 320
Query: 121 tctaagctatgatttagtagacaaaaaaatcaagcacatgttgatcagtgacatagttca 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 tctaagctatgatttagtagacaaaaaa-tcaagcacatgttgatcagtgacatagttca 379
Query: 181 atggacataggcatttgcatcatggtctgataatgtgagatccaatgaactcaaagtgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atggacataggcatttgcatcatggtctgataatgtgagatccaatgaactcaaagtgtc 439
Query: 241 ttcaaaccttaactatgtcctgcacctacctacacagtgtgacatactcatg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcaaaccttaactatgtcctgcacctacctacacagtgtgacatactcatg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
