Query= MSMg01no199_o07.b1 MSMg01no199_o07.b1 CHROMAT_FILE:
MSMg01no199_o07.b1 PHD_FILE: MSMg01no199_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:37 2005
(240 letters)
>mm_chr7_144074887_144075526
Length = 640
Score = 389 bits (201), Expect = e-113
Identities = 207/209 (99%)
Strand = Plus / Minus
Query: 3 cggaattcattcgatccaaggctacatctggtatcagtgggaatgggtgctctgattgct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cggaattcattcgatccaaggctacatctggtatcagtgggaatgggtgctctgattgct 416
Query: 63 aagtacagtacaggctcagaggcactggaagttttaaaccaggcatcaaacttttgaata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aagtacagtacaggctcagaggcactggaagttttaaaccaggcatcaaacttttgaata 356
Query: 123 gaaaaagtcagaatatttctaaaatgggatgctagcatcaagatatactgcatcaatcaa 182
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 355 gaaaaagtcagaatatttctaaaatgggatgctagcatcaagatagactgcatcaatcaa 296
Query: 183 cacacatcaggcagggatgacatgatggg 211
|||||||||||||||||||||||| ||||
Sbjct: 295 cacacatcaggcagggatgacatgttggg 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no199_o07.g1 MSMg01no199_o07.g1 CHROMAT_FILE:
MSMg01no199_o07.g1 PHD_FILE: MSMg01no199_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:37 2005
(527 letters)
>mm_chr7_143941725_143942651
Length = 927
Score = 897 bits (464), Expect = 0.0
Identities = 512/528 (96%), Gaps = 2/528 (0%)
Strand = Plus / Plus
Query: 1 atgggaaaactgcagtacacacctgatagaatagtactcacagttgccaagcataaa-tg 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 atgggaaaactgcagtacacacctgatagaatagtactcacagttgccaagcataaactg 260
Query: 60 gtctgtttgaacactagggtgaactatggctgtacacccaacagaaaagagcatcaagaa 119
||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 261 -tctgtttgaacactagggtgaactatggctgaatacccaacagaaatgagcatcaagaa 319
Query: 120 ccatgatgcaaaagaagccaacaacataccagcatgatagtatctgcttatgtgaaactg 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 320 ccatgatgcaaaagaagccaacaacataccagcataatagtatctgcttatgtgaaactg 379
Query: 180 taatgacctgacatagcagctaaaagcagactgtggatagcttgagagtgggtggccatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taatgacctgacatagcagctaaaagcagactgtggatagcttgagagtgggtggccatc 439
Query: 240 cccataaaaaagaaagaaagaagaaaatgcagaaggaggtaaggactctccatcatttct 299
| || |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 440 ctcagaaaaaagaaagaaagaagaaaacgcagaaggatgtaaggactctcaatcatttct 499
Query: 300 gaggacccagtgaataaaaactgaccaaacttcacccacttcttagtgtggtagccatgt 359
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagacccagtgaataagaactgaccaaacttcacccacttcttagtgtggtagccatgt 559
Query: 360 cttgattaaaaacgctaaacactataaagagccagagaaggactgggtgtttaaggagta 419
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 cttgattaaaaacgctaaacactataacgagccagagaaggactgggtgtttaaggagta 619
Query: 420 tcagctaccactgtagctgttccccaacagccgtttcttctcatggggttaaaccacctt 479
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttagctaccgctgtagctgttccccaacagccgtttcttctcatggggttaaaccacctt 679
Query: 480 gtctgcttacgtactgattccgattccttacgcatgttcttgttaatg 527
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtctgcttacgtactgattccgattccttacgcatgttcttgttaatg 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
