Query= MSMg01no201_e19.b1 MSMg01no201_e19.b1 CHROMAT_FILE:
MSMg01no201_e19.b1 PHD_FILE: MSMg01no201_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:22 2005
(401 letters)
>mm_chr7_109010896_109011697
Length = 802
Score = 748 bits (387), Expect = 0.0
Identities = 399/403 (99%), Gaps = 2/403 (0%)
Strand = Plus / Plus
Query: 1 aaaaataaatacataaaaacaaataaacaaaaa-ccagcagcaaatagaacctgacagct 59
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 aaaaataaatacataaaaacaaataaacaaaaaaccagcagcaaatagaacctgacagct 260
Query: 60 ctcagctaatagagtcaacatggtcatttatccattgatgcacatgatacagattgcttt 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagctaatagagtcaacatgctcatttatccattgatgcacatgatacagattgcttt 320
Query: 120 tcttttgctttttaaaatttttttgtggtgtggtatgtccacctttaatcctagcactca 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttttgcttttttaaatttttttgtggtgtggtatgtccacctttaatcctagcactca 380
Query: 180 ggagattgaggcagacagatctctgtgagagtcaggctagccagaattacatagtagaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagattgaggcagacagatctctgtgagagtcaggctagccagaattacatagtagaac 440
Query: 240 cctgtctcaaaaaataaataataaaaatagcctcctccctctctcctccctctctctatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgtctcaaaaaataaataataaaaatagcctcctccctctctcctccctctctctatc 500
Query: 300 cctttcttgacagggtttcatatattccagactggcactgaactcactatgtagctgaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctttcttgacagggtttcatatattccagactggcactgaactcactatgtagctgaag 560
Query: 360 gtaaccttgaacttctgaccct-actacctctacctcccctgg 401
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 gtaaccttgaacttctgaccctgactacctctacctcccctgg 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 802
Length adjustment: 9
Effective length of query: 392
Effective length of database: 793
Effective search space: 310856
Effective search space used: 310856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_e19.g1 MSMg01no201_e19.g1 CHROMAT_FILE:
MSMg01no201_e19.g1 PHD_FILE: MSMg01no201_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:22 2005
(254 letters)
>mm_chr7_109053379_109054032
Length = 654
Score = 422 bits (218), Expect = e-122
Identities = 237/249 (95%), Gaps = 10/249 (4%)
Strand = Plus / Minus
Query: 1 ctgcctgagnaggcagaaggcagacacttctctttccaaatcagggattagagtattcaa 60
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgcctgagtaggcagatggcagacacttctctttccaaatcagggattagagtattcaa 301
Query: 61 agtctcaatacaaacttttcttcctgattgccttttctgattctcttctgagcacttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agtctcaatacaaacttttcttcctgattgccttttctgattctcttctgagcacttctc 241
Query: 121 tttacttaatctggtgccactcacttattaacaaatcatagggctagagacaa-----tt 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tttacttaatctggtgccactcacttattaacaaatcatagggctagagacaacgcag-- 183
Query: 176 ttttgattaagagcactggctgctgctcccccagaaggcccaagttcaattcccagcacc 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ---tgattaagagcactggctgctgctcccccagaaggcccaagttcaattcccagcacc 126
Query: 236 tacatggtg 244
|||||||||
Sbjct: 125 tacatggtg 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
