MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-201P19
Chromosome	7 (Build37)
Map Location	70,346,196 - 70,346,530
singlet/doublet	singlet
Overlap gene	Chrna7
Upstream gene	Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream gene	Otud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ndn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17984 MGI:97290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Magel2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27385 MGI:1351648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 63 ESTs, 15 Proteins

name	Mkrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22652 MGI:2181178
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Peg12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27412 MGI:1351637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5l-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140551 MGI:2153586
definition	note : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g, pseudogene 1 pseudo : _no_value

name	EG665038 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665038 MGI:3648136
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins pseudo : _no_value

name	LOC669222 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC384631 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384631
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins pseudo : _no_value

name	LOC622243 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG622251 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622251 MGI:3644757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins

name	Chrna7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11441 MGI:99779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Otud7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170711 MGI:2158505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545971 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 289 ESTs, 3 Proteins pseudo : _no_value

name	LOC100041386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 47 ESTs, 5 Proteins pseudo : _no_value

name	LOC665083 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665083
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins pseudo : _no_value

name	Klf13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50794 MGI:1354948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030018B13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381994 MGI:2686543
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Trpm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17364 MGI:1330305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ndn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642896 GeneID:17984 MGI:97290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : necdin transcript_id : NM_010882.3

name	Magel2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380522 GeneID:27385 MGI:1351648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 63 ESTs, 15 Proteins product : melanoma antigen, family L, 2 transcript_id : XM_622091.3

name	Mkrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61675707 GeneID:22652 MGI:2181178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : makorin, ring finger protein, 3 transcript_id : NM_011746.2

name	Peg12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305066 GeneID:27412 MGI:1351637
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paternally expressed 12 transcript_id : NM_013788.1

name	EG622251 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380524 GeneID:622251 MGI:3644757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : predicted gene, EG622251 transcript_id : XM_886670.2

name	Chrna7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982868 GeneID:11441 MGI:99779
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, alpha polypeptide 7 transcript_id : NM_007390.2

name	Otud7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18700017 GeneID:170711 MGI:2158505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OTU domain containing 7A transcript_id : NM_130880.1

name	Klf13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981129 GeneID:50794 MGI:1354948
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kruppel-like factor 13 transcript_id : NM_021366.2

name	E030018B13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380520 GeneID:381994 MGI:2686543
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA E030018B13 gene transcript_id : XM_973294.1

name	Trpm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84993721 GeneID:17364 MGI:1330305
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 1 transcript_id : NM_001039104.1

name	Trpm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370247 GeneID:17364 MGI:1330305
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 1 transcript_id : NM_018752.2

name	Ndn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981598 CCDS:CCDS21326.1 GeneID:17984 MGI:97290
definition	GO_component : GO:0005813 - centrosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043015 - gamma-tubulin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0048676 - axon extension involved in development [Evidence IMP]; GO:0007413 - axonal fasciculation [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IMP]; GO:0006874 - calcium ion homeostasis [Evidence TAS]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0008347 - glial cell migration [Evidence IMP]; GO:0048011 - nerve growth factor receptor signaling pathway [Evidence IMP]; GO:0048666 - neuron development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0001558 - regulation of cell growth [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IGI]; GO:0007585 - respiratory gaseous exchange [Evidence IMP]; GO:0019233 - sensory perception of pain [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : necdin protein_id : NP_035012.2

name	Magel2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906260 GeneID:27385 MGI:1351648
definition	codon_start : 1 product : melanoma antigen, family L, 2 protein_id : XP_622091.2

name	Mkrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61675708 CCDS:CCDS21327.1 GeneID:22652 MGI:2181178
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 127 product : makorin, ring finger protein, 3 protein_id : NP_035876.2

name	Peg12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305067 CCDS:CCDS21328.1 GeneID:27412 MGI:1351637
definition	codon_start : 1 note : frequently rearranged in advanced T-cell lymphomas 3 product : paternally expressed 12 protein_id : NP_038816.1

name	EG622251 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906293 GeneID:622251 MGI:3644757
definition	codon_start : 1 product : hypothetical protein protein_id : XP_891763.1

name	Chrna7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982869 CCDS:CCDS21329.1 GeneID:11441 MGI:99779
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : acetylcholine receptor alpha 7 neural; alpha7 nicotinic receptor product : cholinergic receptor, nicotinic, alpha 7 protein_id : NP_031416.2

name	Otud7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18700018 CCDS:CCDS21330.1 GeneID:170711 MGI:2158505
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : Cezanne 2 protein product : OTU domain containing 7 protein_id : NP_570950.1

name	Klf13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981130 CCDS:CCDS21331.1 GeneID:50794 MGI:1354948
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : basic transcription element binding protein 3; C2-H2 zinc finger protein product : Kruppel-like factor 13 protein_id : NP_067341.2

name	E030018B13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380521 GeneID:381994 MGI:2686543
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978388.1

name	Trpm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993722 CCDS:CCDS21332.1 GeneID:17364 MGI:1330305
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation function : putative ion channel protein note : isoform 2 is encoded by transcript variant Trpm1delta189-1078; melastatin 1 product : transient receptor potential cation channel, subfamily M, member 1 isoform 2 protein_id : NP_001034193.1

name	Trpm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370248 GeneID:17364 MGI:1330305
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; melastatin 1 product : transient receptor potential cation channel, subfamily M, member 1 isoform 1 protein_id : NP_061222.2

name	EG665038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665038
definition	number : 4 pseudo : _no_value

name	EG665038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665038
definition	number : 3 pseudo : _no_value

name	EG665038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665038
definition	number : 2 pseudo : _no_value

name	EG665038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665038
definition	number : 1 pseudo : _no_value

name	LOC669222 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669222
definition	number : 1 pseudo : _no_value

name	LOC622243 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622243
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	misc_feature
link
xref
definition	note : Region similar to Mm#S163718 va61f12.r1 Mus musculus cDNA: gb=AA269701

name	LOC384631 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257503 GeneID:384631
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : similar to tetratricopeptide repeat domain 35 pseudo : _no_value transcript_id : XR_033672.1

name	LOC545971 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257483 GeneID:545971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 289 ESTs, 3 Proteins product : similar to thyroid hormone receptor associated protein 3 pseudo : _no_value transcript_id : XR_032651.1

name	LOC100041386 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257484 GeneID:100041386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 47 ESTs, 5 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_032661.1

name	LOC665083 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257485 GeneID:665083
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins product : similar to ribosomal protein S11 pseudo : _no_value transcript_id : XR_032679.1

clone name	MSMg01-401B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275N24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-201P19.T7 (MSMg01no201_p19.b1)	MSMg01-201P19.TJ (MSMg01no201_p19.g1)
ACC	AG387321	AG387322
length	688	689
length of high quality (start - end)	639 (45 - 683)	338 (79 - 416)
definition	CHROMAT_FILE: MSMg01no201_p19.b1 PHD_FILE: MSMg01no201_p19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:22:37 2005	CHROMAT_FILE: MSMg01no201_p19.g1 PHD_FILE: MSMg01no201_p19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:22:37 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCTCACCTGCGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTT CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTAAGATTC CACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAG ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG ATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTCAGA AAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT ATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGT TCATAGCAGCACCACCCACAATAGCCAGAAGCTGGAAAGAACCCAGATGC CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGG AACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTA GGATACCCAAGATATAAGATACTATTTCCTAAACACAT	CGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAGCTCATTACATGCAGAACT GGAAAGCTGACCTAATAATGCTTCTATAAGTGACATTTCTTAAAATTACA AAAGAAAGATAGGCTTTGTACAGCAAGCCAAATCAAATTTAAAAGAGACT GAGTTGAGGGGAGGGGGAGTCACCCAAATCACCATTGCTTAAGGCATTCT GGGACAGCTTAGTCTGACTTTTCTTCATTTTTATAGGTCAGGAGAGAAAT ACTTAAAAATTAAAGTAGTAAGACACCATTTATGGTATCTTGATGAATAT TAAGCAGCAGTAACTTGAAAAGGATGCAAGTAGGCCAAGTAGTAAAAGAA AGACTGTTGTTTGCCCCCCACCACATAACTCTAGAATCACTACATAATTC ACCCTCTTCTTTTTTGTACATTCAGAAATAACTTAAAATCGTTTTATTTA AACCATCATGGTGTCCCTTTTATGAAATGTGTGGTGGAGTTCTACGCCTG CACCCCCCCCCCTCTTATCTATTTTCCCAATTATAACGCCATCTCCCAAT TGCCTTTATTATTTCCACCCCCCCCCCAATATATTATTATTATCGTTTTT TAGTTGTTTCCTTACTATTTCTTTCTAATTCTTTTATTT
quality values	Open. Hide. 8 8 8 8 8 10 13 28 36 30 33 32 32 28 28 30 21 17 8 8 8 21 21 59 31 30 29 19 15 9 11 11 9 9 9 12 12 28 28 23 25 21 24 24 30 41 53 53 36 36 36 36 33 33 39 37 33 27 18 19 11 9 9 11 19 23 30 33 33 50 50 50 53 53 57 53 53 53 48 48 57 57 57 57 57 53 53 53 53 53 50 68 68 68 68 68 68 68 51 51 47 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 57 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 57 68 68 57 57 57 57 57 57 68 59 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 43 43 35 42 43 50 48 46 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 59 59 59 68 68 68 68 68 59 59 57 54 54 57 57 57 68 68 68 68 68 68 68 59 59 57 57 59 59 59 59 57 57 57 57 57 57 57 57 57 59 57 57 57 50 50 50 50 50 57 53 53 50 50 50 50 41 41 23 23 11 12 12 12 12 11 18 12 11 11 16 22 32 34 41 42 50 50 50 50 50 59 59 59 59 59 59 59 59 57 57 57 57 53 50 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 57 57 57 57 68 68 57 57 57 57 57 57 57 57 59 54 54 57 59 59 59 59 68 68 57 57 57 57 57 48 57 57 57 52 52 59 59 59 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 50 57 57 57 57 54 54 57 57 59 68 59 59 59 59 59 59 59 57 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 57 57 54 54 57 57 57 54 57 57 57 57 57 59 48 48 48 48 48 48 57 59 48 48 59 59 59 57 57 57 48 48 48 48 48 48 48 59 48 48 41 41 40 37 37 30 30 30 31 33 37 37 37 39 35 31 39 35 31 31 39 39 41 41 41 40 40 43 43 36 43 43 39 39 39 39 35 39 39 43 47 47 47 59 59 41 18 9 9 9 9 16 16 27 12 12	Open. Hide. 6 6 6 7 15 15 8 6 6 8 13 20 32 32 36 37 35 35 44 39 39 47 47 50 50 50 50 50 42 23 23 12 10 10 10 9 15 19 25 25 19 22 21 24 30 29 48 57 57 57 53 50 36 36 33 33 33 39 28 20 12 9 9 9 9 9 9 9 29 29 47 47 33 33 33 33 36 36 57 57 57 57 38 42 50 50 50 50 53 53 53 53 53 53 53 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 44 44 32 32 32 32 44 44 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 48 46 46 46 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 68 68 68 68 57 57 57 57 59 68 68 68 59 59 59 59 59 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 43 32 32 23 27 27 35 43 43 59 59 68 68 68 68 59 59 59 57 48 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 44 43 43 43 43 43 44 39 39 39 39 41 41 30 39 41 47 46 54 48 57 54 57 57 54 59 59 68 59 59 59 57 57 48 57 48 48 48 48 48 48 48 48 59 59 57 57 50 50 50 48 59 46 34 28 19 19 19 22 22 30 23 21 11 11 11 12 9 11 15 15 32 33 41 50 50 50 59 59 59 59 59 59 59 59 48 48 48 48 48 57 59 57 57 57 57 50 54 59 59 54 54 54 54 54 54 59 57 59 59 54 54 54 54 57 57 57 48 43 43 31 31 31 34 41 42 54 47 48 48 48 43 43 43 57 46 48 42 48 48 50 50 47 57 48 48 48 42 39 39 39 30 32 24 23 19 24 29 37 41 37 37 37 37 26 26 39 39 39 37 37 41 41 39 39 40 29 23 19 13 13 10 13 13 9 10 9 9 9 9 9 9 9 9 9 10 8 8 10 9 10 11 12 13 23 28 18 22 12 12 12 10 8 8 8 8 8 8 9 9 9 10 8 8 8 10 7 7 8 8 8 6 6 8 8 8 8 15 10 9 9 10 8 8 8 8 8 8 8 10 8 8 10 8 8 8 8 10 8 10 8 8 8 8 8 9 14 11 10 6 10 6 6 8 8 8 8 8 11 11 12 10 8 8 8 8 8 8 8 6 9 12 11 13 13 8 8 6 6 6 6 10 8 10 9 11 11 11 11 10 10 8 8 8 8 8 8 8 8 8 10 10 8 8 10 10 10 12 22 9 8 8 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no201_p19.g1 MSMg01no201_p19.g1 CHROMAT_FILE:
MSMg01no201_p19.g1 PHD_FILE: MSMg01no201_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:37 2005
         (338 letters)



>mm_chr7_70345996_70346733
          Length = 738

 Score =  617 bits (319), Expect = 0.0
 Identities = 331/335 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctagctcattacatgcagaactggaaagctgacctaataatgcttctataagtgacattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctagctcattacatgcagaactggaaagctgacctaataatgcttctataagtgacattt 476

                                                                       
Query: 61  cttaaaattacaaaagaaagataggctttgtacagcaagccaaatcaaatttaaaagaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cttaaaattacaaaagaaagataggctttgtacagcaagccaaatcaaatttaaaagaga 416

                                                                       
Query: 121 ctgagttgaggggagggggagtcacccaaatcaccattgcttaaggcattctgggacagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctgagttgaggggagggggagtcacccaaatcaccattgcttaaggcattctgggacagc 356

                                                                       
Query: 181 ttagtctgacttttcttcatttttataggtcaggagagaaatacttaaaaattaaagtag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ttagtctgacttttcttcatttttataggtcaggagagaaatacttaaaaattaaagtag 296

                                                                       
Query: 241 taagacaccatttatggtatcttgatgaatattaagcagcagtaacttgaaaaggatgca 300
           |||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 295 taagacaccatttatggtgtcttgatgaatattaagcggcattaacttgaaaaggatgca 236

                                              
Query: 301 agtaggccaagtagtaaaagaaagactgttgtttg 335
           ||||||||||||||||||| |||||||||||||||
Sbjct: 235 agtaggccaagtagtaaaataaagactgttgtttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space:   239841
Effective search space used:   239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information