CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGGGTTACCTAGAGACTCCATCTCAAAAAACAAGCAAAGAAAAAC
CAAATGCTATCGAAAAATACAACCCCATTATAAATCAGACACATATTTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCNNNNNTTNNTTNTNNT
TTCTTTCCCTTCCCCTCTTCCCTTCCTCTCCTTTCCCCCTTCCCCCTCCC
TCCTCCCCCCACCTCCTCTTTTCCTCCCTCCCCTCTCCCCTCCCCCTCCC
CCTCTTCCTTCCCCCCTTCTTCTCTCCTCCCTTCCCCCTTACCCCCTTAC
CCTCCTTTTTTTTTTCCCCCCCCCCCCCCCCCTCTACTTCTTACCCCTCC
TTCCTTTTTTTTTTTCCCCCCCCCCCCAAAAAACATACCCCCCTTTTTTT
CCTTCCCCCTTTTCCCTCCCTTCCCCCCCCCTCCCCCTTTTCTTCTCCCC
CCCCCCTTTCCCCCTCTTCCCCCCATTTCCCTCCTCTTCCCCCCCCTCCC
CCCCCTCACCCCCCCCCTCCTCCCCCCTCTTCCTCCCCCCCTCCTTTCTC
CCCCCCCCCTCCTTTTCCCCCTCCTCTCTCCTTTTCCCTTTCTTTTTCCC
CCCCTTTTCCTTCCACCTTTCTCTTCTCCCTCTCCCCTCCTTCCCCTTTT
CTCCCCTCCTTCTCCCTCTCTTTCCCCTCTTTTTCCTTTTTTCCCCCCCT
CCTTCTCCCTTCCTTCTTCTCTCTTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCATTTTAAATAATCATAAATAGC
AAACCCTTGATATTCTTTGGCATACCACAGCTGTTTGATTCAGCTGAGTC
TCTAAGTCTTAGAAATTGCACTTGTTCCTCTTTAAAGTCCCCAGTAGTCT
CCTAAGGTTTCAGCTGAAGGATTCTTTATTGTATTCAAATTTTGTCCCAT
ATGAGTTGTTCCGGTTACTCAAACTATGAAGAGTCTTGGAAATAGAACTG
GGTCCACAGCAGAAAACTCCAACTGTTTTCCTGGAAAGAGACGAGAAGTA
GGAAATCAGGTACAAAATTTGGCAGAACAGGACAAGAAGCCTACTGTATG
AGCATGGGTTTAAAGTATTTGCAAAGTTAATTTCTTGTTCCTTTTCATCT
TAAAACCATTTCCAATTATGATATTCATAGTTGGATTCAGGAAAAAATGT
AACTATGGGCATAAATTGGCTGCTAGAAATTATGCAGTGTGTTTTGTATT
ATCCCCACATGCCACTGGTAACCACACTAAGAGAGTGAACAGATGCCAAA
TCTTTAATTTGTATTTTATAAAAAATTTTTCTAAGTTTTTCACATTGAGT
TTCATGAGAGACAGAGACAGAGAGACAGAGACTCTGAGAGACAGAGACAG
AATGATTATCAT

Query= MSMg01no203_e04.g1 MSMg01no203_e04.g1 CHROMAT_FILE:
MSMg01no203_e04.g1 PHD_FILE: MSMg01no203_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:22 2005
         (636 letters)



>mm_chr7_94544808_94545844
          Length = 1037

 Score = 1176 bits (608), Expect = 0.0
 Identities = 629/636 (98%), Gaps = 1/636 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcattttaaataatcataaatagcaaacccttgatattctttggcataccacagctgttt 60
           ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 727 tcattttaaataatcataaatagcaaacccttggtattctttggcatagcacagctgttt 668

                                                                       
Query: 61  gattcagctgagtctctaagtcttagaaattgcacttgttcctctttaaagtccccagta 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gattcagctgagtttctaagtcttagaaattgcacttgttcctctttaaagtccccagta 608

                                                                       
Query: 121 gtctcctaaggtttcagctgaaggattctttattgtattcaaattttgtcccatatgagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtctcctaaggtttcagctgaaggattctttattgtattcaaattttgtcccatatgagt 548

                                                                       
Query: 181 tgttccggttactcaaactatgaagagtcttggaaatagaactgggtccacagcagaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgttccggttactcaaactatgaagagtcttggaaatagaactgggtccacagcagaaaa 488

                                                                       
Query: 241 ctccaactgttttcctggaaagagacgagaagtaggaaatcaggtacaaaatttggcaga 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 487 ctccaactgttttcctggaaagagaagagaagtaggaaatcaggtacaaaatttggcaga 428

                                                                       
Query: 301 acaggacaagaagcctactgtatgagcatgggtttaaagtatttgcaaagttaatttctt 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 427 acaggacaagaagcctactgtatgagcacgggtttaaagtatttgcaaagttaatttctt 368

                                                                       
Query: 361 gttccttttcatcttaaaacca-tttccaattatgatattcatagttggattcaggaaaa 419
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 367 gttccttttcatcttaaaaccattttccaattatgatattcatagttggattcaggaaaa 308

                                                                       
Query: 420 aatgtaactatgggcataaattggctgctagaaattatgcagtgtgttttgtattatccc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aatgtaactatgggcataaattggctgctagaaattatgcagtgtgttttgtattatccc 248

                                                                       
Query: 480 cacatgccactggtaaccacactaagagagtgaacagatgccaaatctttaatttgtatt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cacatgccactggtaaccacactaagagagtgaacagatgccaaatctttaatttgtatt 188

                                                                       
Query: 540 ttataaaaaatttttctaagtttttcacattgagtttcatgagagacagagacagagaga 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttataaaaaatttttctaagtttttcacattgagtttcatgagagacagagacagagaga 128

                                               
Query: 600 cagagactctgagagacagagacagaatgattatca 635
           ||||||| ||||||||||||||||||||||||||||
Sbjct: 127 cagagacactgagagacagagacagaatgattatca 92


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space:   642902
Effective search space used:   642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)