Query= MSMg01no203_h03.b1 MSMg01no203_h03.b1 CHROMAT_FILE:
MSMg01no203_h03.b1 PHD_FILE: MSMg01no203_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:36 2005
(215 letters)
>mm_chr7_128003104_128003718
Length = 615
Score = 408 bits (211), Expect = e-118
Identities = 214/215 (99%)
Strand = Plus / Minus
Query: 1 ggcagacaactgtctgcctcgcagtactcagctaatatcaaaaacgttgtaggtcataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 326 ggcagacaactgtctgcctcgcagtactcagctaatatcaaaaacgttgtaggccataaa 267
Query: 61 taaatgcaactgaattaaggcatgtaattcaacacctaagcgcatgcctattgaatggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 taaatgcaactgaattaaggcatgtaattcaacacctaagcgcatgcctattgaatggtt 207
Query: 121 ttcagtaaaagcatgaggtccgccaggcgtggtggcgcacgcctttaatcccagcactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttcagtaaaagcatgaggtccgccaggcgtggtggcgcacgcctttaatcccagcactcg 147
Query: 181 ggaggcagaggcaggtggatttctgagtccgaggc 215
|||||||||||||||||||||||||||||||||||
Sbjct: 146 ggaggcagaggcaggtggatttctgagtccgaggc 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no203_h03.g1 MSMg01no203_h03.g1 CHROMAT_FILE:
MSMg01no203_h03.g1 PHD_FILE: MSMg01no203_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:36 2005
(206 letters)
>mm_chr7_127905545_127906149
Length = 605
Score = 329 bits (170), Expect = 8e-95
Identities = 195/208 (93%), Gaps = 10/208 (4%)
Strand = Plus / Plus
Query: 1 caggacagccagagctacacagaaaaaccctgtctcgaaaaaaattttttcccct----- 55
|||||||||||| |||||||||| |||||||||||||||||||||||||| |
Sbjct: 200 caggacagccagggctacacagagaaaccctgtctcgaaaaaaatttttt----ttagat 255
Query: 56 aattgaaacttgtaaaatcctgccacctttctatgtgtgtaagtgacagttgacgagcct 115
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aattgaaacttgtaaa-tcctgccacctttctatgtgtgtaagtgacagttgacgagcct 314
Query: 116 cctcctgtgtgtgacagtgcttggtgatgatgctgcctgatggtgacaagtctttctgtt 175
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 315 cctcctgtgtgtgacagtgcttggtgatgatgctgcctgatggtgacaagcctttctgtt 374
Query: 176 gtcccaacagcactattgaactctatca 203
||||||||||||||||||||||||||||
Sbjct: 375 gtcccaacagcactattgaactctatca 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 605
Length adjustment: 8
Effective length of query: 198
Effective length of database: 597
Effective search space: 118206
Effective search space used: 118206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
