Query= MSMg01no205_b01.b1 MSMg01no205_b01.b1 CHROMAT_FILE:
MSMg01no205_b01.b1 PHD_FILE: MSMg01no205_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:50 2005
(683 letters)
>mm_chr7_137615656_137616739
Length = 1084
Score = 1284 bits (664), Expect = 0.0
Identities = 676/680 (99%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagtaagt-tccataactaaggtgactctctagataaatccactggcataaaat 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattcaagtaagtatacataactaaggtgactctctagataaatccactggcatgaaat 264
Query: 64 ttttaatttaagaaaaaagtattaccttcttatatttataagcactatcactggatttaa 123
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttaatttaaaaaaaaagtattaccttcttatatttataagcactatcactggatttaa 324
Query: 124 aatttatgataaaggacttaccacaaatggttttaataaatatatacagaaagaaaagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatttatgataaaggacttaccacaaatggttttaataaatatatacagaaagaaaagag 384
Query: 184 ctactattactattgaacatacagattttcttttaaaattaaattgttaatactaagtgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctactattactattgaacatacagattttcttttaaaattaaattgttaatactaagtgc 444
Query: 244 tttgccttaatctgatttttgtgtattttaaatcctgactctctcaataaaaagacttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgccttaatctgatttttgtgtattttaaatcctgactctctcaataaaaagacttta 504
Query: 304 caaagtaaggctctttccaaacggtataccaaaagtaatagaagtccaaacgtggactct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaagtaaggctctttccaaacggtataccaaaagtaatagaagtccaaacgtggactct 564
Query: 364 cccaactaaacagtgtttactgagcactacgacccaaccttggactgctcagtgactggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccaactaaacagtgtttactgagcactacgacccaaccttggactgctcagtgactggt 624
Query: 424 ctgagcttccttcactgctgttcaaccggcaactcctgctcttacagcccttcttacagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgagcttccttcactgctgttcaaccggcaactcctgctcttacagcccttcttacagg 684
Query: 484 aacacatattccatggtgacatagcagactgagaactcaatgaatgccgagatcaaacaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aacacatattccatggtgacatagcagactgagaactcaatgaatgccgagatcaaacaa 744
Query: 544 gactgatgtccccatggagactaatccaccccaggatttactattcaaggtttttctgaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gactgatgtccccatggagactaatccaccccaggatttactattcaaggtttttctgaa 804
Query: 604 gcattcacgcacaactaatgggcaatgaaaactgtcagggaagatgaccctaattttgaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gcattcacgcacaactaatgggcaatgaaaactgtcagggaagatgaccctaattttgaa 864
Query: 664 cacagctaagaaggtcttgg 683
||||||||||||||||||||
Sbjct: 865 cacagctaagaaggtcttgg 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no205_b01.g1 MSMg01no205_b01.g1 CHROMAT_FILE:
MSMg01no205_b01.g1 PHD_FILE: MSMg01no205_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:50 2005
(312 letters)
>mm_chr7_137720390_137721101
Length = 712
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Minus
Query: 1 ggttttctcttctgctcatctccccaaactcagagccagacagcgaatgtttatctcttc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 512 ggttttctcttctgctcatctccccaaactcagaggcagacagcgaatgtttatctcttc 453
Query: 61 agccacatcatggaaaatcactttggaagggctttcttttgcaacatgccatccagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agccacatcatggaaaatcactttggaagggctttcttttgcaacatgccatccagacat 393
Query: 121 ctttcccaatacgggccggtgttttcactccccgcccagggttggctgcagcttctgaaa 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctttcccaatacgggctggtgttttcactccccgcccagggttggctgcagcttctgaaa 333
Query: 181 ggcaagtttgttcctgaagctgagttagcgccagcgtgcacacatatgcacatacacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggcaagtttgttcctgaagctgagttagcgccagcgtgcacacatatgcacatacacaaa 273
Query: 241 cgaatgacaactccctccaccccaaccgcaaatgccaagtagcctggggtacagcgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cgaatgacaactccctccaccccaaccgcaaatgccaagtagcctggggtacagcgctcc 213
Query: 301 caggagggtttt 312
||||||||||||
Sbjct: 212 caggagggtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
