Query= MSMg01no205_l15.b1 MSMg01no205_l15.b1 CHROMAT_FILE:
MSMg01no205_l15.b1 PHD_FILE: MSMg01no205_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:39 2005
(679 letters)
>mm_chr7_109175794_109176872
Length = 1079
Score = 1212 bits (627), Expect = 0.0
Identities = 663/675 (98%)
Strand = Plus / Plus
Query: 5 gaattcaggaccttccgaagagcagtcagtgctcttagctgctgaaccatctctccagcc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaccttcagaagagcagtcagtgctcttagctgctgaaccatctctccagcc 264
Query: 65 cctggacccctcctttaaagcccgtttttactctcacctgttaactatttctctagacat 124
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctgaacccctcttttaaagcccgtttttactctcacctgttaactatttctctagacat 324
Query: 125 tagcattggttcctcccaagcatctaccctttcaagtcacggggacagctgagactgcat 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 tagcattggttcctcccaagcatctaccctttcaagtcacggagacagctgagactgcat 384
Query: 185 gagcacaaagatctgagtttgaccttgagtaccctcgttacaaaagttgcttgcagcagc 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 gagcacaaagatctgagtttgaccttgagtacccacgttacaaaagttgcttgcagcagc 444
Query: 245 ctatgtctctgaactgaacgcaggagagtagaggacagacagctggatgcctggatctca 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 ctatgtctctgaactgaacgcaggagaggagaggacagacagctggatgcctggatctca 504
Query: 305 atggccagtgatcctaggtgaattgatgagctcctgctttgctgacagataattttgcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggccagtgatcctaggtgaattgatgagctcctgctttgctgacagataattttgcaa 564
Query: 365 aaaccaccgtgtagggcagtcacgatggctcataggtaaagcacttgctgtgcaagcctg 424
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaattaaagtgtagggcagtcacgatggctcataggtaaagcacttgctgtgcaagcctg 624
Query: 425 gtaatctgaattagatcctaggaacaggtggaaaggcacaggagagaagcaactccacaa 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtaatctgaattagagcctaggaacaggtggaaaggcacaggagagaagcaactccacaa 684
Query: 485 acttgttctccgtctacacgagtaccacggctcatgcacacctacacccacacagcatac 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 685 acttgttctccgtctacacgagtaccacggctcatgcacacctacacccacacatcatac 744
Query: 545 atacaggcaataataattaagaataaagataatgagcgcacgcatacacacacagataca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atacaggcaataataattaagaataaagataatgagcgcacgcatacacacacagataca 804
Query: 605 aaagaagaaagaaaaaccctgcccacactcagtccggctgacagaactcttatggtgcta 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaagaagaaagaaaaaccctgcccacactcagtccggctgacagaactcttatggtgcta 864
Query: 665 cttcctctgttcagt 679
|||||||||||||||
Sbjct: 865 cttcctctgttcagt 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no205_l15.g1 MSMg01no205_l15.g1 CHROMAT_FILE:
MSMg01no205_l15.g1 PHD_FILE: MSMg01no205_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:39 2005
(283 letters)
>mm_chr7_109307537_109308219
Length = 683
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 cagacagatcacacaggcctaaaaggcttttggatagggtcagagccacccatgttgctg 60
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 622 cagacagatcacacaggcctaaaaggcttttggatagggtcagag-tagccatgttgctg 564
Query: 61 tattaaaatacctctacgggggtatatgcttttaatccaaacacttgggaggccaaggca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tattaaaatacctctacggtggtatatgcttttaatccaaacacttgggaggccaaggca 504
Query: 121 agtggatctctgacttctagtgtgcatttctaaccatgctccagtttccaaataacaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agtggatctctgacttctagtgtgcatttctaaccatgctccagtttccaaataacaact 444
Query: 181 cagaagcttattatttataaaaaattccaagaccataaactagggttgttcccagtagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagaagcttattatttataaaaaattccaagaccataaactagggttgttcccagtagct 384
Query: 241 cataacttattttacccatttaaactgttctgtgtctgccaca 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cataacttattttacccatttaaactgttctgtgtctgccaca 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
