Query= MSMg01no206_d19.b1 MSMg01no206_d19.b1 CHROMAT_FILE:
MSMg01no206_d19.b1 PHD_FILE: MSMg01no206_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:21 2005
(289 letters)
>mm_chr7_144170895_144171583
Length = 689
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Plus
Query: 1 tcttcttcttcaacttatttgtagccccatggacacacctcccccaggtatctgcaagtg 60
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tcttcttcatcaacttatttgtagccccatggacacacctcccccgggtatctgcaagtg 260
Query: 61 cctttctgttcagcccataggtgcctcattagaagaccacccttgaccctcttgtcacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctttctgttcagcccataggtgcctcattagaagaccacccttgaccctcttgtcacca 320
Query: 121 gtaatcacagttcaactggtccatgactcaacgatgagtggcactgaaggatgtgatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaatcacagttcaactggtccatgactcaacgatgagtggcactgaaggatgtgatgtt 380
Query: 181 cctctgtatgattgggtaggactatatacgtgtgccagcctgtgagtggtgtgcctgcga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctctgtatgattgggtaggactatatacgtgtgccagcctgtgagtggtgtgcctgcgg 440
Query: 241 aggccccgagctgatatcgtagcacaagttactgtgaaatactgga 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggccccgagctgatatcgtagcacaagttactgtgaaatactgga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no206_d19.g1 MSMg01no206_d19.g1 CHROMAT_FILE:
MSMg01no206_d19.g1 PHD_FILE: MSMg01no206_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:21 2005
(291 letters)
>mm_chr7_144294088_144294780
Length = 693
Score = 509 bits (263), Expect = e-148
Identities = 285/293 (97%), Gaps = 2/293 (0%)
Strand = Plus / Minus
Query: 1 aaaagaagttgtgactgaattctgagcaatggaagcaagctcaaatggggcccctgactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 493 aaaagaagttgtgactgaattctgagcaatggaagcaagctcaaatggggcagctgactt 434
Query: 61 tggtttctcacctattcaaatgaggaagaggctatgcaggtgagggaggggggag--cac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 433 tggtttctcacctattcaaatgaggaagaggctatgcaggtgagggaggggggagcacac 374
Query: 119 agggcaggtagctgggatggcaggcagatgggaagggggctgcacctgctcaagaggaag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agggcaggtagctgggatggcaggcagatgggaagggggctgcacctgctcaagaggaag 314
Query: 179 cccaccatgtaggggagcctggcacacacatggtgactgcacttgcatccctacacctcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cccaccatgtaggggagcctggcacacacatggtgactgcacttgcatccctacacctcc 254
Query: 239 ctggagagaatggggtgcaaaggccatacgagtagggtggtacacttaacttc 291
|||||||||||||| | |||||||||||||||| |||||| ||||||||||||
Sbjct: 253 ctggagagaatgggatacaaaggccatacgagtggggtggcacacttaacttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
