Query= MSMg01no210_g24.b1 MSMg01no210_g24.b1 CHROMAT_FILE:
MSMg01no210_g24.b1 PHD_FILE: MSMg01no210_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:58 2005
(324 letters)
>mm_chr7_61990269_61991003
Length = 735
Score = 513 bits (265), Expect = e-150
Identities = 314/343 (91%), Gaps = 22/343 (6%)
Strand = Plus / Plus
Query: 4 ggaattccagatcagaacaaccacccactgaccaagaacagtgccagctgcagatgtacc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagatcagaacaaccacccactgaccaagaacagtgccagctgcagatgtacc 263
Query: 64 acagcaagatgtgccactgtccaaagtgtgtggctctctgaagatgctcagtcagtcatt 123
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagcaagatgggccagtgtccaaagtgtgtggctctctgaagatgctcagtcagtcatt 323
Query: 124 ctcaggttaccttgtctcatggatcaaaaaccttatactgaattcagcaaaactaaaagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcaggttaccttgtctcatggatcaaaaaccttatactgaattcagcaaaactaaaagc 383
Query: 184 tacccaaaacacaaaaa---------acaaaattaaacatgagaattgagacaaatatct 234
||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 384 tacccaaaacacacacacacacacacacaaaattaaacatgagaattgagacaaatatct 443
Query: 235 tgggtagtgatgatttgtccatttttttt--actgtctaatatgtaat-----------c 281
||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 444 tgggtagtgatgatttgcccattttttttttactgtctaatatgtaattaacatcaaatc 503
Query: 282 atcaatctttatcctctaggttttccatgtattatatatggaa 324
|||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 504 atcaatctttatcctctaggttttccctgtatcatatatggaa 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 735
Length adjustment: 9
Effective length of query: 315
Effective length of database: 726
Effective search space: 228690
Effective search space used: 228690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_g24.g1 MSMg01no210_g24.g1 CHROMAT_FILE:
MSMg01no210_g24.g1 PHD_FILE: MSMg01no210_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:58 2005
(636 letters)
>mm_chr7_62113339_62114374
Length = 1036
Score = 1193 bits (617), Expect = 0.0
Identities = 631/636 (99%)
Strand = Plus / Minus
Query: 1 tcttaaactctaactatgtaaaacttgttttttgtgagtttctgggtgatgactgaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 tcttaaactctaactatgtaaaacttgttttttgtgagtttctgggtgatgactgaataa 777
Query: 61 aaactgaatgtatttagattgagcagagaatgatctttcagtatcaggcaatatgcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 aaactgaatgtatttagattgagcagagaatgatctttcagtatcaggcaatatgcactg 717
Query: 121 tgagctagtttccctctcagtgttacaagtcacagaaatgataaatcaatgttattaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tgagctagtttccctctcagtgttacaagtcacagaaatgataaatcaatgttattaatt 657
Query: 181 gatttattaaatttagagcccttcaggaagtgaagaagccatagcaaacaattattttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gatttattaaatttagagcccttcaggaagtgaagaagccatagcaaacaattattttag 597
Query: 241 gaaaccacaagaagcagattaactcaaatacagtgagtgacagatttctaaaataacatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaaaccacaagaagcagattaactcaaatacagtgagtgacagatttctaaaataacatc 537
Query: 301 tgccctctgtaaaaagagaaaaatagaagctgaggaacacatacaacgcaagccctttac 360
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 536 tgtcctctgtaaaaagagaaaaatagaagctgaggaacacatacaaggcaagccctttac 477
Query: 361 cacttctctctatatacttttctttcttcaactttctatggttaagcaaaccatctacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cacttctctctatatacttttctttcttcaactttctatggttaagcaaaccatctacca 417
Query: 421 ctgaatatgaatccctaaatgctgatgctgtccattttagtcaacgtagttcttgggatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctgaatatgaatccctaaatgctgatgctgtccattttagtcaacgtagttcttgggatg 357
Query: 481 gtactcaaatcaccacaagtgtccaccctagtttctttctattttagtgcatggcttttc 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 356 gtactcaaatcaccacaagtgtccaccctagtttctttctattctagtgcatggcttttc 297
Query: 541 tctttttattcattcaattactgttgaggattatttagtttaagaatattttagattaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tctttttattcattcaattactgttgaggattatttagtttaagaatattttagattaaa 237
Query: 601 tttatgtacctatctatcatctantatctagctatc 636
||||||||||||||||||||||| |||||| |||||
Sbjct: 236 tttatgtacctatctatcatctaatatctatctatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
