Query= MSMg01no211_a07.b1 MSMg01no211_a07.b1 CHROMAT_FILE:
MSMg01no211_a07.b1 PHD_FILE: MSMg01no211_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:48 2005
(410 letters)
>mm_chr7_37632050_37632859
Length = 810
Score = 779 bits (403), Expect = 0.0
Identities = 406/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgggtcaaa-cctccctcacttaagtgatttctgtcaggtatttggtcacagg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctgggtcaaaacctccctcacttaagtgatttctgtcaggtatttggtcacagg 263
Query: 64 taaagaaactaacagagaaatctagggcatttccccatctgcttttttctgtaacaccaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taaagaaactaacagagaaatctagggcatttccccatctgcttttttctgtaacaccaa 323
Query: 124 aatgttgcaacagaacagatgttatctgagtgactcacatgctccccagccccaaaatcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatgttgcaacagaacagatgttatctgagtgactcacatgctccccagccccaaaatcc 383
Query: 184 atagaagatgagtatctctcttggatcctctcattctgcagcccttttgtctgtgttctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atagaagatgagtatctctcttggatcctctcattctgcagcccttttgtctgtgttctg 443
Query: 244 tgaatgtccactgaaaatgtaaaaccttgcacgaagagagaccaaggaaatatgccttct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaatgtccactgaaaatgtaaaaccttgcacgaagagagaccaaggaaatatgccttct 503
Query: 304 tggtcccgggttgccatgaagttgccattactaagtggccattttcctttcttcagtaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tggtcccgggttgccatgaagttgccattactaagtggccattttcctttcttcagtaat 563
Query: 364 acattgctgtgtgtcaaaccagaggatgcaccatgctaagacaatgt 410
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acattgctgtgtgtcaaaccagaggatgcaccatgctaagacaatgt 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_a07.g1 MSMg01no211_a07.g1 CHROMAT_FILE:
MSMg01no211_a07.g1 PHD_FILE: MSMg01no211_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:48 2005
(388 letters)
>mm_chr7_37670308_37671095
Length = 788
Score = 750 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Minus
Query: 1 taataaccaactgcattttcctgaaaggtgtgagactcctcccagtatgccctccgtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 taataaccaactgcattttcctgaaaggtgtgagactcctcccagtatgccctccgtgta 529
Query: 61 aactaacaagacattcccagggagctgcccatacctctgctccagggcgggttagaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aactaacaagacattcccagggagctgcccatacctctgctccagggcgggttagaacca 469
Query: 121 agcttaagctgatagtggaagactctcgggtgtctatttaatatgaagagggtttgactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agcttaagctgatagtggaagactctcgggtgtctatttaatatgaagagggtttgactc 409
Query: 181 ctggatctttatccacctgcgtgggttcagtgatctcaatgggagctccatcttttctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctggatctttatccacctgcgtgggttcagtgatctcaatgggagctccatcttttctag 349
Query: 241 tgatcgcacctctgaagcgatgttataaggccaagaaattgatttcctgggttgcaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgatcgcacctctgaagcgatgttataaggccaagaaattgatttcctgggttgcaaaaa 289
Query: 301 tcattcccaggtcatcagtgtcaaagccaagtgttttgtggatctcatttttttttccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcattcccaggtcatcagtgtcaaagccaagtgttttgtggatctcatttttttttccct 229
Query: 361 ttaaagttaaagtgtagtctgttttgta 388
||||||||||||||||||||||||||||
Sbjct: 228 ttaaagttaaagtgtagtctgttttgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
