Query= MSMg01no217_c07.b1 MSMg01no217_c07.b1 CHROMAT_FILE:
MSMg01no217_c07.b1 PHD_FILE: MSMg01no217_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:29 2005
(425 letters)
>mm_chr7_97862100_97862925
Length = 826
Score = 640 bits (331), Expect = 0.0
Identities = 385/403 (95%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 16 gaattcagctgaac-atacaacaccattgtttttactgtacctaatgatgttgcaaattg 74
|||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||
Sbjct: 617 gaattcagctgaacaatacaacaccattggttttactgtacccaatgatgttgaaaattg 558
Query: 75 caaactcgaggttctattcccttttctgaacccttggttctgtatggagcaccaaagaaa 134
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 557 caaactcgaggttctattcccttttctgaacacttggttctgtatggagcaccaaagaaa 498
Query: 135 ttctcatattcaatttccccatgctgtgtacagatctcatactttctcttctgtaaaata 194
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 497 ttctcatattcaatttccttatgctgtgtacaaatctcatactttctcttctgtaaaata 438
Query: 195 aaaggtcatcattgttttggtccgcttgagtcccagactaccataac-cagatacattta 253
|||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||
Sbjct: 437 aaaggtcatcattgttttggtccgcttgagtcccagactaccat-acacagaaacactta 379
Query: 254 agtagagcactcaaaaaaagtttgatcagtgttctaagtgtctacattatgctttgcaac 313
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 378 agtagagcactgaaaaaaagtttgatcagtgtgctaagtgtctacattatgctttgcaac 319
Query: 314 cagacaattttcttgaaagggattccatgagactagaagaatggagttgagtatgaagtg 373
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 318 cagacaattttcttgaaagggattccatgaggctagaagaatggagttgaatatgaagtg 259
Query: 374 ttctagtgacctttctgttgctgtgacaaatgcctttaaaaaa 416
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 258 atctagtgacctttctgttgctgtgacaaatgccttgaaaaaa 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space: 339872
Effective search space used: 339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_c07.g1 MSMg01no217_c07.g1 CHROMAT_FILE:
MSMg01no217_c07.g1 PHD_FILE: MSMg01no217_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:29 2005
(387 letters)
>mm_chr7_97717703_97718489
Length = 787
Score = 675 bits (349), Expect = 0.0
Identities = 373/385 (96%), Gaps = 8/385 (2%)
Strand = Plus / Plus
Query: 2 actggagttggggattgccgcacaccaatgagtctaggaaaagatgtgaggaggcgtaga 61
|||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||
Sbjct: 202 actggagttggggattgccgtaaaccaatgagtctaggaaaagatgtgaggaggggtaga 261
Query: 62 cctccactgaagatgagagttgggaggaggggaggacacacgtggttcattgacgagcta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cctccactgaagatgagagttgggaggaggggaggacacacgtggttcattgacgagcta 321
Query: 122 agggcgatacggggacatggaatttggaggagctgagggatccctggagatttgctatta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agggcgatacggggacatggaatttggaggagctgagggatccctggagatttgctatta 381
Query: 182 gcctatttatttccctggttggagtgtgtttaaatatttaatgataaaattaaaacatat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcctatttatttccctggttggagtgtgtttaaatatttaatgataaaattaaaacatat 441
Query: 242 atcaatactatcttcagtgttaacattctgacataaacaaatgcactggttttccctgtc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atcaatactatcttcagtgttaacattctgacataaacaaatgcactggttttccctgtc 501
Query: 302 ctactctttctcctttctgctattggtgtatttta----agctgtgttttggggtggaac 357
|||||||||||||||||||||||||||||| | ||||||| |||||||||||||
Sbjct: 502 ctactctttctcctttctgctattggtgta----acggaagctgtgctttggggtggaac 557
Query: 358 cttgcagttatggatatagctgttt 382
|||||||||||||||||||||||||
Sbjct: 558 cttgcagttatggatatagctgttt 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
