Query= MSMg01no217_e23.b1 MSMg01no217_e23.b1 CHROMAT_FILE:
MSMg01no217_e23.b1 PHD_FILE: MSMg01no217_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:47 2005
(425 letters)
>mm_chr7_12525952_12526779
Length = 828
Score = 696 bits (360), Expect = 0.0
Identities = 398/412 (96%), Gaps = 3/412 (0%)
Strand = Plus / Plus
Query: 16 gaattccttttctctaacctgt---tctgagtttataagttggcctccttcccttaatat 72
||||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||
Sbjct: 216 gaattccttttctctaatctgtttatttgagtctataagttggcctccttcccttaatat 275
Query: 73 tgtcattgcataatcaattataggaaagtatttgctcttttggtctctctctgtggatag 132
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgtcattgtagaatcaattataggaaagtatttgctcttttggtctctctctgtggatag 335
Query: 133 ctttgcgttgcacagcttctctcatcaaccattttcaccttctatttacttgctattact 192
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctttgcgttgcacagcttctatcatcaaccattttcaccttctatttacttgctattact 395
Query: 193 tagtgcacgtttctaaagtttaaaaggggccagttaagtggctgagagcataacagccag 252
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tagtgtacgtttctaaagtttaaaaggggccagttaagtggctgagagcataacagccag 455
Query: 253 ccattgtacccaatgtgagaatctgaattccatgtggaggacccacaaggtaaaaaagaa 312
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 456 ccattgtacccaatgtgagaatctgaattccatgtggaggacccacaaggtaagaaagaa 515
Query: 313 aacaaaaacaaaaaccaaatcccacagggtagtggaggtaaggttaatcctctctagaat 372
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aacaaaaaccaaaaccaaatcccacagggtagtggaggtaaggttaatcctctctagaac 575
Query: 373 attgtgagactctgggctttgtttcctccaagttggaactcacctgtcctct 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 actgtgagactctgggctttgtttcctccaagttggaactcacctgtcctct 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 828
Length adjustment: 9
Effective length of query: 416
Effective length of database: 819
Effective search space: 340704
Effective search space used: 340704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_e23.g1 MSMg01no217_e23.g1 CHROMAT_FILE:
MSMg01no217_e23.g1 PHD_FILE: MSMg01no217_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:47 2005
(380 letters)
>mm_chr7_12693957_12694736
Length = 780
Score = 704 bits (364), Expect = 0.0
Identities = 376/380 (98%)
Strand = Plus / Minus
Query: 1 ttcttagagggaattatcaggatttttctagatatgcagagctggggctaagttgggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttcttagagggaattatcaggatttttctagatatgcagagctggggctaagttgggttt 521
Query: 61 tcatctgttattcagtcagcagaaaaggtatctttcttttattttatttccttgcttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcatctgttattcagtcagcagaaaaggtatctttcttttattttatttccttgcttgtt 461
Query: 121 ttcactcctctagttagacaccatcttttcacataggccaggctgatcttggtgttctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttcactcctctagttagacaccatcttttcacataggccaggctgatcttggtgttctta 401
Query: 181 ggctaccaagctgtgctaggattacagcccttccttctaagagtactaggtagaaagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggctaccaagctgtgctaggattacagcccttccttctaagagtactaggtagaaagtca 341
Query: 241 tgggatgccccacagaagttccaattcaatcacattctgaaattaatctgtaactgactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgggatgccccacagaagttccaattcaatcacattctgaaattaatctgtaactgactc 281
Query: 301 actggagccaattttagacataactttatattattcagaacagagacccaaacacacacc 360
|||||||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 280 actggagccaattttagacataactttagatgaagcagaacagagacccaaacacacacc 221
Query: 361 acatcacagtgcttcttgat 380
||||||||||||||||||||
Sbjct: 220 acatcacagtgcttcttgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
