Query= MSMg01no217_o10.b1 MSMg01no217_o10.b1 CHROMAT_FILE:
MSMg01no217_o10.b1 PHD_FILE: MSMg01no217_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:44 2005
(268 letters)
>mm_chr7_77490970_77491637
Length = 668
Score = 487 bits (252), Expect = e-142
Identities = 264/268 (98%)
Strand = Plus / Minus
Query: 1 cttttaaatggacttattgctcccagcgtgggttcctctctctaaatgttacaccattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 468 cttttaaatggacttattgctcccagcgtgggttcctctctctaaatgttagaaaattgt 409
Query: 61 gccatctacccgctatgccgagtactgtcacacttggagaccttggggacctccggactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gccatctacccgctatgccgagtactgtcacacttggagaccttggggacctccggactg 349
Query: 121 gcttcaatgctgcagtgtcaggggccgctgcgggcagcaggaggaggggcagctcacgtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 348 gcttcaatgctgcagtgtcaggggccgctgcgggcagcaggaggaggggcggctcacgtg 289
Query: 181 gatttttacagctctccgcctgcagccagccctcgtggccgcgacagggcatggcccgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gatttttacagctctccgcctgcagccagccctcgtggccgcgacagggcatggcccgcg 229
Query: 241 atgcgcggagcctcctgctttctggcgg 268
||||||||||||||||||||||||||||
Sbjct: 228 atgcgcggagcctcctgctttctggcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no217_o10.g1 MSMg01no217_o10.g1 CHROMAT_FILE:
MSMg01no217_o10.g1 PHD_FILE: MSMg01no217_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:44 2005
(227 letters)
>mm_chr7_77326689_77327315
Length = 627
Score = 354 bits (183), Expect = e-102
Identities = 217/237 (91%), Gaps = 15/237 (6%)
Strand = Plus / Plus
Query: 1 cactctttcatagcaagtgttttatcctctgagcaaaattcacagtccccatgaaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactctttcatagcaagtgttttatcctctgagcaaaattcacagtccccatgaaccaaa 260
Query: 61 tacttcgaataactaacactcaagttctggaaaactgtactttagtatgaaacatcttaa 120
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttcgaataactaacactaaagttctggaaaactgtactttagtatgaaacatcttaa 320
Query: 121 ttctatttttagtatgtaagtgacataccaaagaggacagagatatgaaaagtgttccaa 180
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 ttctatttttagtatgtaagtaacataccaaagagaacagagatatgaaaagtgttccaa 380
Query: 181 gatgtcatatttaaaa------------tctaatggagccttgcaagagaaaatata 225
||||||| | |||| |||||||||||||||||||||||||||||
Sbjct: 381 gatgtcaga---aaaaaaaaaaaaacaatctaatggagccttgcaagagaaaatata 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
